RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 IKZF4Q9H2S9 585 aa18.48■□□□□ 0.55
CDK5RAP3-207ENST00000578134 AGPAT5Q9NUQ2 364 aa18.48■□□□□ 0.55
CDK5RAP3-207ENST00000578134 A0A1B0GTH6 734 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 TISP43B9A030 160 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 ABLIM1O14639 778 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 B4GALT5O43286 388 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 STX10O60499 249 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 EDN1P05305 212 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 HOXA11P31270 313 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 CASP4P49662 377 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 COPB1P53618 953 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 ATN1P54259 1190 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 SURF1Q15526 300 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 SNRNP35Q16560 246 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 ZNF568Q3ZCX4 644 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 SLC27A1Q6PCB7 646 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 TRIM59Q8IWR1 403 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 TMC2Q8TDI7 906 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 TMEM40Q8WWA1 233 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 MRFAP1L1Q96HT8 127 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 ZBTB45Q96K62 511 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 NOC4LQ9BVI4 516 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 PDZD7Q9H5P4 517 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 ANKFY1Q9P2R3 1169 aa18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 NOC2LQ9Y3T9 749 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDK5RAP3-207ENST00000578134 PQBP1O60828 265 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 CSDE1O75534 798 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 TLE2Q04725 743 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 NR1I3Q14994 352 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 VWA3BQ502W6 1294 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 HSP90AA4PQ58FG1 418 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 APTXQ7Z2E3 356 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 FAM228AQ86W67 206 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 EEF2KMTQ96G04 330 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 RTN4Q9NQC3 1192 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 IFNKQ9P0W0 207 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 ST3GAL5Q9UNP4 418 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 CENPFP49454 3210 aa18.46■□□□□ 0.55
CDK5RAP3-207ENST00000578134 TTLL13PA6NNM8 815 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CLTAP09496 248 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CTSHP09668 335 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 ZSCAN20P17040 1043 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 ZNF75DP51815 510 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 FAAP100Q0VG06 881 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 BFSP1Q12934 665 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 PAK2Q13177 524 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 FKBP15Q5T1M5 1219 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 LRRC8DQ7L1W4 858 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 RDH13Q8NBN7 331 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 FAM213AQ9BRX8 229 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 TRAIPQ9BWF2 469 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 HAPLN2Q9GZV7 340 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CDT1Q9H211 546 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 NDST4Q9H3R1 872 aa18.45■□□□□ 0.54
CDK5RAP3-207ENST00000578134 LGALS16A8MUM7 142 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 ADCY5O95622 1261 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CDC25BP30305 580 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 GTF2H1P32780 548 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 VAMP7P51809 220 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 AP3M2P53677 418 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 LPIN1Q14693 890 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 TRIM60Q495X7 471 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 EEF1DP3Q658K8 133 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 TRAF7Q6Q0C0 670 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 ZBTB33Q86T24 672 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CD302Q8IX05 232 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 SAAL1Q96ER3 474 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CPB2Q96IY4 423 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 NAP1L5Q96NT1 182 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 TSPAN18Q96SJ8 248 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 XPO4Q9C0E2 1151 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 VPS16Q9H269 839 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 ERVK-5Q9HDB9 667 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CPSF3Q9UKF6 684 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 PADI3Q9ULW8 664 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 PIN4Q9Y237 131 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 USP20Q9Y2K6 914 aa18.44■□□□□ 0.54
CDK5RAP3-207ENST00000578134 GOLGA8IPA6NC78 632 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 GOLGA8JA6NMD2 632 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 PMM2O15305 246 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 P4HA2O15460 535 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 AP5Z1O43299 807 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 FAM189A1O60320 539 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 N4BP1O75113 896 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 IL18RAPO95256 599 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 AFPP02771 609 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 SKIP12755 728 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 FGFR4P22455 802 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 GRM5P41594 1212 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CYP24A1Q07973 514 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 NFX1Q12986 1120 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 PSMD6Q15008 389 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CRELD2Q6UXH1 353 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CBWD2Q8IUF1 395 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 HACE1Q8IYU2 909 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 PARD3BQ8TEW8 1205 aa18.43■□□□□ 0.54
CDK5RAP3-207ENST00000578134 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms