RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PDIA4P13667 645 aaKnown RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 KLRC2P26717 231 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 CCT6AP40227 531 aaKnown RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 RARRES1P49788 294 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 CLCN4P51793 760 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 AFF1P51825 1210 aaKnown RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 EMC2Q15006 297 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 KRT79Q5XKE5 535 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 ARL6IP4Q66PJ3 421 aaKnown RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 ASTLQ6HA08 431 aaPredicted RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 SRGAP1Q7Z6B7 1085 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 GPR149Q86SP6 731 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 PIGOQ8TEQ8 1089 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 ACSF2Q96CM8 615 aaPredicted RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 FAM193BQ96PV7 902 aaPredicted RBP17.74■□□□□ 0.43
VAPA-204ENST00000577901 TMEM175Q9BSA9 504 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 MFSD1Q9H3U5 465 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 MINDY3Q9H8M7 445 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 RSAD1Q9HA92 442 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 KANSL3Q9P2N6 904 aa17.74■□□□□ 0.43
VAPA-204ENST00000577901 STX6O43752 255 aa17.73■□□□□ 0.43
VAPA-204ENST00000577901 CNPP09543 421 aaKnown RBP17.73■□□□□ 0.43
VAPA-204ENST00000577901 HOXA11P31270 313 aaPredicted RBP17.73■□□□□ 0.43
VAPA-204ENST00000577901 LAMTOR4Q0VGL1 99 aa17.73■□□□□ 0.43
VAPA-204ENST00000577901 UBXN11Q5T124 520 aa17.73■□□□□ 0.43
VAPA-204ENST00000577901 CCDC149Q6ZUS6 474 aa17.73■□□□□ 0.43
VAPA-204ENST00000577901 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
VAPA-204ENST00000577901 MRPL17Q9NRX2 175 aaKnown RBP17.73■□□□□ 0.43
VAPA-204ENST00000577901 BMP2KQ9NSY1 1161 aaPredicted RBP17.73■□□□□ 0.43
VAPA-204ENST00000577901 FAN1Q9Y2M0 1017 aa17.73■□□□□ 0.43
VAPA-204ENST00000577901 A0A087WWV3 80 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 PROB1E7EW31 1015 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 NRP1O14786 923 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 LILRB3O75022 631 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 POMCP01189 267 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 CLCN5P51795 746 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 MXD4Q14582 209 aaPredicted RBP17.72■□□□□ 0.43
VAPA-204ENST00000577901 IL17AQ16552 155 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 POTEGQ6S5H5 508 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 OTOP3Q7RTS5 596 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 ZSCAN16Q9H4T2 348 aaPredicted RBP17.72■□□□□ 0.43
VAPA-204ENST00000577901 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
VAPA-204ENST00000577901 ZFHX2Q9C0A1 2572 aaPredicted RBP17.71■□□□□ 0.43
VAPA-204ENST00000577901 VWA3AA6NCI4 1184 aa17.71■□□□□ 0.43
VAPA-204ENST00000577901 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
VAPA-204ENST00000577901 C15orf39Q6ZRI6 1047 aa17.71■□□□□ 0.43
VAPA-204ENST00000577901 KIAA1024Q9UPX6 916 aa17.71■□□□□ 0.43
VAPA-204ENST00000577901 DENND4AQ7Z401 1863 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 ARHGEF35A5YM69 484 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 C2CD2LO14523 706 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 ERLIN2O94905 339 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 SOD2P04179 222 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 URODP06132 367 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 ITGA4P13612 1032 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 RESTQ13127 1097 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 TDGQ13569 410 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 TFDP1Q14186 410 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 SF3A1Q15459 793 aaKnown RBP17.7■□□□□ 0.42
VAPA-204ENST00000577901 RNF149Q8NC42 400 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 SMG8Q8ND04 991 aaKnown RBP17.7■□□□□ 0.42
VAPA-204ENST00000577901 CNNM3Q8NE01 707 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 MCPH1Q8NEM0 835 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 FLCNQ8NFG4 579 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 UBN1Q9NPG3 1134 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
VAPA-204ENST00000577901 DNM3Q9UQ16 869 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 VPS13AQ96RL7 3174 aa17.7■□□□□ 0.42
VAPA-204ENST00000577901 USO1O60763 962 aaKnown RBP17.69■□□□□ 0.42
VAPA-204ENST00000577901 NBL1P41271 181 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 ECM1Q16610 540 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 PADI6Q6TGC4 694 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 ASCL5Q7RTU5 278 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 TAS1R1Q7RTX1 841 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 SNX27Q96L92 541 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 AK8Q96MA6 479 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 RPS6KC1Q96S38 1066 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 HERC2P3Q9BVR0 1158 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 KCNK12Q9HB15 430 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 XPNPEP1Q9NQW7 623 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 MAN1C1Q9NR34 630 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 MARCH5Q9NX47 278 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 PRG3Q9Y2Y8 225 aaPredicted RBP17.69■□□□□ 0.42
VAPA-204ENST00000577901 IPPQ9Y573 584 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 PLXNA3P51805 1871 aa17.69■□□□□ 0.42
VAPA-204ENST00000577901 ARL5CA6NH57 179 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 PP2D1A8MPX8 630 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 TSPAN1O60635 241 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 CDC25AP30304 524 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 ARL2P36404 184 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 OR1G1P47890 313 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 POU5F1BQ06416 359 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 ZRSR1Q15695 479 aaKnown RBP17.68■□□□□ 0.42
VAPA-204ENST00000577901 CWF19L1Q69YN2 538 aaKnown RBP17.68■□□□□ 0.42
VAPA-204ENST00000577901 MAEAQ7L5Y9 396 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 COLGALT2Q8IYK4 626 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 KCTD17Q8N5Z5 321 aa17.68■□□□□ 0.42
VAPA-204ENST00000577901 CMASQ8NFW8 434 aaPredicted RBP17.68■□□□□ 0.42
VAPA-204ENST00000577901 CDK5RAP3Q96JB5 506 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms