RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
MKS1-206ENST00000577824 AGPAT3Q9NRZ7 376 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 CHD9Q3L8U1 2897 aa13.9□□□□□ -0.18
MKS1-206ENST00000577824 CDH23Q9H251 3354 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 TISP43B9A030 160 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 ANKRD63C9JTQ0 380 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 KIAA0391O15091 583 aaKnown RBP13.89□□□□□ -0.19
MKS1-206ENST00000577824 INPPL1O15357 1258 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 CLDN3O15551 220 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 AMHP03971 560 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
MKS1-206ENST00000577824 GRM5P41594 1212 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 DEFB103AP81534 67 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 POU5F1Q01860 360 aaKnown RBP13.89□□□□□ -0.19
MKS1-206ENST00000577824 MYBPC2Q14324 1141 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 CENPPQ6IPU0 288 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
MKS1-206ENST00000577824 SLC9A9Q8IVB4 645 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 ZC3H3Q8IXZ2 948 aaKnown RBP13.89□□□□□ -0.19
MKS1-206ENST00000577824 MLKLQ8NB16 471 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 PHOSPHO2Q8TCD6 241 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 TOP1MTQ969P6 601 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
MKS1-206ENST00000577824 NXF3Q9H4D5 531 aaKnown RBP13.89□□□□□ -0.19
MKS1-206ENST00000577824 CXXC1Q9P0U4 656 aaPredicted RBP13.89□□□□□ -0.19
MKS1-206ENST00000577824 IPPQ9Y573 584 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 PCDHB2Q9Y5E7 798 aa13.89□□□□□ -0.19
MKS1-206ENST00000577824 A0A1W2PPC1 479 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 BIN1O00499 593 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 PSMA7O14818 248 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 OGTO15294 1046 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
MKS1-206ENST00000577824 NPTXRO95502 500 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 KCNJ6P48051 423 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 NLRP12P59046 1061 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 LRRC63Q05C16 580 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 STIM1Q13586 685 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 SHHQ15465 462 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 KYAT1Q16773 422 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 EDRF1Q3B7T1 1238 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 CT47A1Q5JQC4 288 aaPredicted RBP13.88□□□□□ -0.19
MKS1-206ENST00000577824 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 CDR2LQ86X02 465 aaPredicted RBP13.88□□□□□ -0.19
MKS1-206ENST00000577824 NELFCDQ8IXH7 590 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 SYCP3Q8IZU3 236 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 DHTKD1Q96HY7 919 aaPredicted RBP13.88□□□□□ -0.19
MKS1-206ENST00000577824 ZBTB45Q96K62 511 aaPredicted RBP13.88□□□□□ -0.19
MKS1-206ENST00000577824 FBXL18Q96ME1 805 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 DMAC2Q9NW81 257 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 ANKFY1Q9P2R3 1169 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 CHD7Q9P2D1 2997 aa13.88□□□□□ -0.19
MKS1-206ENST00000577824 ADRB2P07550 413 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 CCNE1P24864 410 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
MKS1-206ENST00000577824 ARMCX5Q6P1M9 558 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 AGMOQ6ZNB7 445 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 TDHQ8IZJ6 230 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 ZNF689Q96CS4 500 aaPredicted RBP13.87□□□□□ -0.19
MKS1-206ENST00000577824 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
MKS1-206ENST00000577824 CBWD1Q9BRT8 395 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 TRIM6Q9C030 488 aaPredicted RBP13.87□□□□□ -0.19
MKS1-206ENST00000577824 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 UBN1Q9NPG3 1134 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 RNF19AQ9NV58 838 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 CPSF3Q9UKF6 684 aaKnown RBP13.87□□□□□ -0.19
MKS1-206ENST00000577824 MAPK8IP1Q9UQF2 711 aa13.87□□□□□ -0.19
MKS1-206ENST00000577824 ZBBXA8MT70 800 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 HOXA2O43364 376 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 DGKIO75912 1065 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 GJB5O95377 273 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 LDHAP00338 332 aaKnown RBP13.86□□□□□ -0.19
MKS1-206ENST00000577824 HTRA4P83105 476 aaPredicted RBP13.86□□□□□ -0.19
MKS1-206ENST00000577824 PAK1Q13153 545 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 HSP90AA2PQ14568 343 aaPredicted RBP13.86□□□□□ -0.19
MKS1-206ENST00000577824 STX1AQ16623 288 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 XKR4Q5GH76 650 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 ISM2Q6H9L7 571 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 TTI2Q6NXR4 508 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 CRELD2Q6UXH1 353 aaPredicted RBP13.86□□□□□ -0.19
MKS1-206ENST00000577824 CEP120Q8N960 986 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 P2RX5Q93086 422 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 MSTO1Q9BUK6 570 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 HSPBP1Q9NZL4 362 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 DACH1Q9UI36 760 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 AGO2Q9UKV8 859 aaKnown RBP13.86□□□□□ -0.19
MKS1-206ENST00000577824 GIT1Q9Y2X7 761 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 SLC4A7Q9Y6M7 1214 aa13.86□□□□□ -0.19
MKS1-206ENST00000577824 BICDL2A1A5D9 508 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 MEIS3P2A8K0S8 358 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 MAPK13O15264 365 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms