RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 YEATS4O95619 227 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 ALDH2P05091 517 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 SRGAP2BP0DMP2 458 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 HARSP12081 509 aaKnown RBP16.76■□□□□ 0.27
SMG6-220ENST00000576218 DDIT3P35638 169 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 SLC11A1P49279 550 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 NDUFV1P49821 464 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 KCNQ1P51787 676 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 YARSP54577 528 aaKnown RBP16.76■□□□□ 0.27
SMG6-220ENST00000576218 HYAL1Q12794 435 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 SMC1AQ14683 1233 aaKnown RBP16.76■□□□□ 0.27
SMG6-220ENST00000576218 USP49Q70CQ1 688 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 ZBTB33Q86T24 672 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 ZNF280BQ86YH2 543 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 LINC00301Q8NCQ3 95 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 TMEM175Q9BSA9 504 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 PARVGQ9HBI0 331 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
SMG6-220ENST00000576218 BLOC1S4Q9NUP1 217 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 SNTG2Q9NY99 539 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 ARHGAP28Q9P2N2 729 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 ANKFY1Q9P2R3 1169 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 CFAP45Q9UL16 551 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 PRG3Q9Y2Y8 225 aaPredicted RBP16.76■□□□□ 0.27
SMG6-220ENST00000576218 PCDHGC5Q9Y5F6 944 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
SMG6-220ENST00000576218 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 TTLL13PA6NNM8 815 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 H3BQ06 376 aaPredicted RBP16.75■□□□□ 0.27
SMG6-220ENST00000576218 GALTP07902 379 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 ME1P48163 572 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 AFF1P51825 1210 aaKnown RBP16.75■□□□□ 0.27
SMG6-220ENST00000576218 ERVFC1P60507 584 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 GRIK3Q13003 919 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 CAMK1Q14012 370 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 NT5DC1Q5TFE4 455 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 SV2BQ7L1I2 683 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 ADGRD2Q7Z7M1 963 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 VPS52Q8N1B4 723 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 PDILTQ8N807 584 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 SPIRE2Q8WWL2 714 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 IGSF21Q96ID5 467 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 CCDC94Q9BW85 323 aaPredicted RBP16.75■□□□□ 0.27
SMG6-220ENST00000576218 TARS2Q9BW92 718 aaKnown RBP16.75■□□□□ 0.27
SMG6-220ENST00000576218 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 TNFSF13BQ9Y275 285 aa16.75■□□□□ 0.27
SMG6-220ENST00000576218 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
SMG6-220ENST00000576218 PER2O15055 1255 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 PPP6R2O75170 966 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 RECQL4O94761 1208 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 DDHD2O94830 711 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 GTF2F1P35269 517 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMG6-220ENST00000576218 OSTNP61366 133 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 PKP1Q13835 747 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 CLUL1Q15846 466 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 ARSHQ5FYA8 562 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 DYMQ7RTS9 669 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 FAM178BQ8IXR5 827 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 ADAMTS19Q8TE59 1207 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 TOPORSQ9NS56 1045 aaPredicted RBP16.74■□□□□ 0.27
SMG6-220ENST00000576218 STK39Q9UEW8 545 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 FAM50BQ9Y247 325 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
SMG6-220ENST00000576218 MYO7AQ13402 2215 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 UNC80Q8N2C7 3258 aa16.74■□□□□ 0.27
SMG6-220ENST00000576218 NRP1O14786 923 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 TRAK2O60296 914 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 CUTAO60888 179 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 EDN1P05305 212 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 LIG4P49917 911 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 GIT2Q14161 759 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 ATL3Q6DD88 541 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 MPZL3Q6UWV2 235 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 HAUS6Q7Z4H7 955 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
SMG6-220ENST00000576218 TMEM173Q86WV6 379 aaPredicted RBP16.73■□□□□ 0.27
SMG6-220ENST00000576218 TMEM161BQ8NDZ6 487 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 UHRF1Q96T88 793 aaPredicted RBP16.73■□□□□ 0.27
SMG6-220ENST00000576218 CDCA3Q99618 268 aaPredicted RBP16.73■□□□□ 0.27
SMG6-220ENST00000576218 ACO2Q99798 780 aaKnown RBP16.73■□□□□ 0.27
SMG6-220ENST00000576218 COLEC11Q9BWP8 271 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 COL25A1Q9BXS0 654 aaPredicted RBP16.73■□□□□ 0.27
SMG6-220ENST00000576218 ATP6V1DQ9Y5K8 247 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 ZMYM2Q9UBW7 1377 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 MYH11P35749 1972 aa16.73■□□□□ 0.27
SMG6-220ENST00000576218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.72■□□□□ 0.27
SMG6-220ENST00000576218 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 FSCN2O14926 492 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 HNRNPDLO14979 420 aaKnown RBP16.72■□□□□ 0.27
SMG6-220ENST00000576218 CXCL14O95715 111 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 THP07101 528 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 MAPTP10636 758 aaKnown RBP16.72■□□□□ 0.27
SMG6-220ENST00000576218 IDEP14735 1019 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 SCP2P22307 547 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 ABCD1P33897 745 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 NCKAP1LP55160 1127 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 DNM1Q05193 864 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms