RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ITGA8P53708 1063 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 SLC12A3P55017 1021 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 PPP1R15BQ5SWA1 713 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 PHLDB3Q6NSJ2 640 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 LLGL2Q6P1M3 1020 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 RNPEPL1Q9HAU8 725 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 MTUS1Q9ULD2 1270 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 TTC7AQ9ULT0 858 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 PEX11AO75192 247 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 FAM13AO94988 1023 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 LUC7L3O95232 432 aaKnown RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 OAS1P00973 400 aaKnown RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 FMO5P49326 533 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 RCN2Q14257 317 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 SHROOM1Q2M3G4 852 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 EPM2AIP1Q7L775 607 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 SYCP3Q8IZU3 236 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 ZNF513Q8N8E2 541 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 GBP7Q8N8V2 638 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 EXOC3O60645 756 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 PECAM1P16284 738 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 KRT15P19012 456 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 CALB2P22676 271 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 GCLMP48507 274 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 DLG4P78352 724 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 PHC3Q8NDX5 983 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 NEDD1Q8NHV4 660 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 ZSWIM1Q9BR11 485 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 INTS2Q9H0H0 1204 aaKnown RBP15.55■□□□□ 0.08
SCARF1-209ENST00000576012 DNAJC18Q9H819 358 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 AAASQ9NRG9 546 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 PKD2L1Q9P0L9 805 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 CHKBQ9Y259 395 aa15.55■□□□□ 0.08
SCARF1-209ENST00000576012 PODXLO00592 558 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 MARSP56192 900 aaKnown RBP15.54■□□□□ 0.08
SCARF1-209ENST00000576012 NFIXQ14938 502 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 TBC1D9BQ66K14 1250 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 ASRGL1Q7L266 308 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 NBPF5PQ86XG9 351 aaPredicted RBP15.54■□□□□ 0.08
SCARF1-209ENST00000576012 RAB3IPQ96QF0 476 aaPredicted RBP15.54■□□□□ 0.08
SCARF1-209ENST00000576012 KLF6Q99612 283 aaPredicted RBP15.54■□□□□ 0.08
SCARF1-209ENST00000576012 DENND2DQ9H6A0 471 aaPredicted RBP15.54■□□□□ 0.08
SCARF1-209ENST00000576012 PCDHA1Q9Y5I3 950 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 MYO3BQ8WXR4 1341 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 A0A0A6YYK5 440 aaPredicted RBP15.54■□□□□ 0.08
SCARF1-209ENST00000576012 ANKRD62A6NC57 917 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 UBTFL6P0CB48 400 aaPredicted RBP15.54■□□□□ 0.08
SCARF1-209ENST00000576012 ZCCHC18P0CG32 403 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 TPBGLP0DKB5 382 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 TAC1P20366 129 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 ZNF76P36508 570 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 DNAJC9Q8WXX5 260 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 NPHS2Q9NP85 383 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
SCARF1-209ENST00000576012 GOLGA8RI6L899 631 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 TGFB1I1O43294 461 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 SEPT2Q15019 361 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 ARHGAP27Q6ZUM4 889 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 SLC13A5Q86YT5 568 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 AGPAT1Q99943 283 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 STK33Q9BYT3 514 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 UBN1Q9NPG3 1134 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 PHTF1Q9UMS5 762 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 CACNA1SQ13698 1873 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 SYNGAP1Q96PV0 1343 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 A6NHS1 94 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 GJB6O95452 261 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 SGPL1O95470 568 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 RAB27AP51159 221 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 KHDC1Q4VXA5 237 aaKnown RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 TAF1BQ53T94 588 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 ISLR2Q6UXK2 745 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 STK32AQ8WU08 396 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 RIOX1Q9H6W3 641 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 CNOT7Q9UIV1 285 aaKnown RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 PSMC2P35998 433 aaKnown RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 CPA2P48052 419 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 PEX5P50542 639 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 RWDD2BP57060 319 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 WDR4P57081 412 aaKnown RBP15.53■□□□□ 0.08
SCARF1-209ENST00000576012 MYL7Q01449 175 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 CCNJLQ8IV13 435 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 ARHGEF19Q8IW93 802 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 SLC5A5Q92911 643 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 ART4Q93070 314 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 NUP85Q9BW27 656 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 KLHL11Q9NVR0 708 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 PARP2Q9UGN5 583 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 ANAPC5Q9UJX4 755 aa15.53■□□□□ 0.08
SCARF1-209ENST00000576012 CFAP69A5D8W1 941 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 C2orf71A6NGG8 1288 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 RANBP1P43487 201 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 KLC1Q07866 573 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 ARHGEF18Q6ZSZ5 1173 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 GSTA5Q7RTV2 222 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms