RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ABLIM1O14639 778 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 TLL1O43897 1013 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 ITGA4P13612 1032 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 ATF7P17544 494 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-217ENST00000575711 KNOP1Q1ED39 458 aaKnown RBP15.29■□□□□ 0.04
RPAIN-217ENST00000575711 SLC39A4Q6P5W5 647 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 HS2ST1Q7LGA3 356 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 ABI1Q8IZP0 508 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 CRIPAKQ8N1N5 446 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 SMG8Q8ND04 991 aaKnown RBP15.29■□□□□ 0.04
RPAIN-217ENST00000575711 POMGNT1Q8WZA1 660 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 LPPQ93052 612 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 YME1L1Q96TA2 773 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 NXF3Q9H4D5 531 aaKnown RBP15.29■□□□□ 0.04
RPAIN-217ENST00000575711 UBN1Q9NPG3 1134 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 HES2Q9Y543 173 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 INSL6Q9Y581 213 aa15.29■□□□□ 0.04
RPAIN-217ENST00000575711 CEP290O15078 2479 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 ZMYM2Q9UBW7 1377 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 TISP43B9A030 160 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 BIN1O00499 593 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 DGKIO75912 1065 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 FGFR1P11362 822 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 HOXD13P35453 343 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 GRM5P41594 1212 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 SNRPFP62306 86 aaKnown RBP15.28■□□□□ 0.04
RPAIN-217ENST00000575711 CCDC183Q5T5S1 534 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 ISM2Q6H9L7 571 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 FAM109BQ6ICB4 259 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-217ENST00000575711 ARMCX5Q6P1M9 558 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 THNSL1Q8IYQ7 743 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 GUF1Q8N442 669 aaKnown RBP15.28■□□□□ 0.04
RPAIN-217ENST00000575711 GOLGA5Q8TBA6 731 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 RSPH1Q8WYR4 309 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 SYAP1Q96A49 352 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-217ENST00000575711 RAD9AQ99638 391 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 MSTO1Q9BUK6 570 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 CCDC94Q9BW85 323 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-217ENST00000575711 IKZF4Q9H2S9 585 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 RSAD1Q9HA92 442 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 PARP2Q9UGN5 583 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 MAPK8IP1Q9UQF2 711 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 STYXL1Q9Y6J8 313 aa15.28■□□□□ 0.04
RPAIN-217ENST00000575711 A0A0B4J269 797 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 OGTO15294 1046 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 GARTP22102 1010 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 AKAP5P24588 427 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 PPP1R2P41236 205 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 RABGGTBP53611 331 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 HTRA4P83105 476 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-217ENST00000575711 STIM1Q13586 685 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 MORC3Q14149 939 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 RAB30Q15771 203 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 KYAT1Q16773 422 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 KLHL40Q2TBA0 621 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 LRIT3Q3SXY7 679 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 COBLL1Q53SF7 1204 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 GLB1LQ6UWU2 654 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 AGMOQ6ZNB7 445 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 SMYD4Q8IYR2 804 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-217ENST00000575711 CEP120Q8N960 986 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 ACAP3Q96P50 834 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 HAPLN2Q9GZV7 340 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 TYW1Q9NV66 732 aaKnown RBP15.27■□□□□ 0.04
RPAIN-217ENST00000575711 SNTG2Q9NY99 539 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.04
RPAIN-217ENST00000575711 MSRAQ9UJ68 235 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 AGO2Q9UKV8 859 aaKnown RBP15.27■□□□□ 0.04
RPAIN-217ENST00000575711 GIT1Q9Y2X7 761 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 PCDHA11Q9Y5I1 949 aa15.27■□□□□ 0.04
RPAIN-217ENST00000575711 TTC3P53804 2025 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 TBKBP1A7MCY6 615 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 MEIS3P2A8K0S8 358 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 KIAA0391O15091 583 aaKnown RBP15.26■□□□□ 0.03
RPAIN-217ENST00000575711 TGFB1I1O43294 461 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 RECQL4O94761 1208 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 ADSSP30520 456 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 PRCPP42785 496 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 GATMP50440 423 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 YARSP54577 528 aaKnown RBP15.26■□□□□ 0.03
RPAIN-217ENST00000575711 OSTNP61366 133 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 SMAD3P84022 425 aaKnown RBP15.26■□□□□ 0.03
RPAIN-217ENST00000575711 CLLU1OSQ5K130 101 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 CMTR2Q8IYT2 770 aaKnown RBP15.26■□□□□ 0.03
RPAIN-217ENST00000575711 URGCPQ8TCY9 931 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 HELQQ8TDG4 1101 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 ZNF689Q96CS4 500 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-217ENST00000575711 CBWD1Q9BRT8 395 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 PBX4Q9BYU1 374 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 AGPAT3Q9NRZ7 376 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 TOPORSQ9NS56 1045 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-217ENST00000575711 RNF19AQ9NV58 838 aa15.26■□□□□ 0.03
RPAIN-217ENST00000575711 PDXKO00764 312 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 CALUO43852 315 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 OFD1O75665 1012 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 LDHAP00338 332 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms