RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CASP10Q92851 521 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 APOL6Q9BWW8 343 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 PHF7Q9BWX1 381 aaPredicted RBP19.25■□□□□ 0.67
SMG6-214ENST00000573827 RAB34Q9BZG1 259 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 SMC3Q9UQE7 1217 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 FAN1Q9Y2M0 1017 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 PRG3Q9Y2Y8 225 aaPredicted RBP19.25■□□□□ 0.67
SMG6-214ENST00000573827 PTGESO14684 152 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 EPCAMP16422 314 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 NAB2Q15742 525 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 MAPK6Q16659 721 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 HERC4Q5GLZ8 1057 aaPredicted RBP19.24■□□□□ 0.67
SMG6-214ENST00000573827 TMEM31Q5JXX7 168 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 KRT79Q5XKE5 535 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 RINT1Q6NUQ1 792 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 TAS1R3Q7RTX0 852 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 LRRC15Q8TF66 581 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 BACH2Q9BYV9 841 aa19.24■□□□□ 0.67
SMG6-214ENST00000573827 TRIM6Q9C030 488 aaPredicted RBP19.24■□□□□ 0.67
SMG6-214ENST00000573827 TDRD15B5MCY1 1934 aaKnown RBP19.23■□□□□ 0.67
SMG6-214ENST00000573827 H3BQV1 296 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 SOD2P04179 222 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 CNPP09543 421 aaKnown RBP19.23■□□□□ 0.67
SMG6-214ENST00000573827 ALADP13716 330 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 PRPF4BQ13523 1007 aaKnown RBP19.23■□□□□ 0.67
SMG6-214ENST00000573827 GIT2Q14161 759 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 PPP2R5AQ15172 486 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 TMEM119Q4V9L6 283 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 KIAA0319Q5VV43 1072 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 LARP1BQ659C4 914 aaKnown RBP19.23■□□□□ 0.67
SMG6-214ENST00000573827 ARL6IP4Q66PJ3 421 aaKnown RBP19.23■□□□□ 0.67
SMG6-214ENST00000573827 DEPTORQ8TB45 409 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 KLHL5Q96PQ7 755 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 FAM193BQ96PV7 902 aaPredicted RBP19.23■□□□□ 0.67
SMG6-214ENST00000573827 HERC2P3Q9BVR0 1158 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 APOL5Q9BWW9 433 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 ADAM7Q9H2U9 754 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 CHST7Q9NS84 486 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 KLK14Q9P0G3 267 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 ARHGAP28Q9P2N2 729 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 STK39Q9UEW8 545 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 MUTYHQ9UIF7 546 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
SMG6-214ENST00000573827 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.23■□□□□ 0.67
SMG6-214ENST00000573827 CACNA1HO95180 2353 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 N4BP3O15049 544 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 HIP1RO75146 1068 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 SRGAP2BP0DMP2 458 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 NPTX2P47972 431 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 EFNA5P52803 228 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 GRIK3Q13003 919 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 KANK3Q6NY19 840 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 PAAF1Q9BRP4 392 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 PTPRHQ9HD43 1115 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 SNTG2Q9NY99 539 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 CACNG4Q9UBN1 327 aa19.22■□□□□ 0.67
SMG6-214ENST00000573827 VWA3AA6NCI4 1184 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 ABLIM1O14639 778 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 RECQL4O94761 1208 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 GUCY2CP25092 1073 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 OR1G1P47890 313 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 CLCN4P51793 760 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 SLC12A3P55017 1021 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 HACE1Q8IYU2 909 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 C12orf76Q8N812 135 aaPredicted RBP19.21■□□□□ 0.67
SMG6-214ENST00000573827 IFT74Q96LB3 600 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 RPS6KC1Q96S38 1066 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 GPR62Q9BZJ7 368 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 RXFP1Q9HBX9 757 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 PARP2Q9UGN5 583 aa19.21■□□□□ 0.67
SMG6-214ENST00000573827 SSBP05455 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMG6-214ENST00000573827 PEX3P56589 373 aa19.2■□□□□ 0.66
SMG6-214ENST00000573827 DSG1Q02413 1049 aa19.2■□□□□ 0.66
SMG6-214ENST00000573827 GRIN1Q05586 938 aa19.2■□□□□ 0.66
SMG6-214ENST00000573827 ITIH3Q06033 890 aa19.2■□□□□ 0.66
SMG6-214ENST00000573827 KCTD17Q8N5Z5 321 aa19.2■□□□□ 0.66
SMG6-214ENST00000573827 NTPCRQ9BSD7 190 aaKnown RBP19.2■□□□□ 0.66
SMG6-214ENST00000573827 DZANK1Q9NVP4 752 aa19.2■□□□□ 0.66
SMG6-214ENST00000573827 TNFSF13BQ9Y275 285 aa19.2■□□□□ 0.66
SMG6-214ENST00000573827 PRR33A8MZF0 331 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 TEX28O15482 410 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 PAPLNO95428 1278 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 PROZP22891 400 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 BMS1Q14692 1282 aaKnown RBP19.19■□□□□ 0.66
SMG6-214ENST00000573827 TPRNQ4KMQ1 711 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 ARSHQ5FYA8 562 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 ATF7IP2Q5U623 682 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 BRAPQ7Z569 592 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 SYT2Q8N9I0 419 aaPredicted RBP19.19■□□□□ 0.66
SMG6-214ENST00000573827 RABGGTAQ92696 567 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 RPGRIP1Q96KN7 1286 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 ACO2Q99798 780 aaKnown RBP19.19■□□□□ 0.66
SMG6-214ENST00000573827 POMKQ9H5K3 350 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 TMEM134Q9H6X4 195 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 MRPL17Q9NRX2 175 aaKnown RBP19.19■□□□□ 0.66
SMG6-214ENST00000573827 PHLPP2Q6ZVD8 1323 aa19.19■□□□□ 0.66
SMG6-214ENST00000573827 MEFVO15553 781 aaPredicted RBP19.18■□□□□ 0.66
SMG6-214ENST00000573827 WEE2P0C1S8 567 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 LIG1P18858 919 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 IGFBP6P24592 240 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms