RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TSSK4Q6SA08 328 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 PRSS55Q6UWB4 352 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 SRGAP1Q7Z6B7 1085 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 CCDC148Q8NFR7 591 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 PSPC1Q8WXF1 523 aaKnown RBP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 CPB2Q96IY4 423 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 CHAMP1Q96JM3 812 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 GPR62Q9BZJ7 368 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 SLKQ9H2G2 1235 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 MIOSQ9NXC5 875 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 VPS54Q9P1Q0 977 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 IPPQ9Y573 584 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 CACNA1GO43497 2377 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 CCL16O15467 120 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 PRPF3O43395 683 aaKnown RBP13.61□□□□□ -0.23
PRPF8-208ENST00000573716 EDIL3O43854 480 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 TDP2O95551 362 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 PSMC5P62195 406 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 PRKCQQ04759 706 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 DSC1Q08554 894 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 LPAL2Q16609 132 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 ADCK5Q3MIX3 580 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 LIN9Q5TKA1 542 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 MTSS1LQ765P7 747 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 RNF168Q8IYW5 571 aaPredicted RBP13.61□□□□□ -0.23
PRPF8-208ENST00000573716 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
PRPF8-208ENST00000573716 RNF149Q8NC42 400 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 TBCKQ8TEA7 893 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 CEP170P1Q96L14 293 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 SLC26A6Q9BXS9 759 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 TRIM6Q9C030 488 aaPredicted RBP13.61□□□□□ -0.23
PRPF8-208ENST00000573716 ZSCAN32Q9NX65 697 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 GMEB2Q9UKD1 530 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 CHD8Q9HCK8 2581 aa13.61□□□□□ -0.23
PRPF8-208ENST00000573716 TADA2AO75478 443 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 CPA1P15085 419 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 NLRP5P59047 1200 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 PFKPQ01813 784 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 CREMQ03060 361 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 ZBTB41Q5SVQ8 909 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 LILRA6Q6PI73 481 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 TPRG1Q6ZUI0 275 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 ING5Q8WYH8 240 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 FGF13Q92913 245 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 RTKNQ9BST9 563 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 PHF20Q9BVI0 1012 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 LTB4R2Q9NPC1 389 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 FNIP2Q9P278 1114 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 CACNG4Q9UBN1 327 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 ADAM28Q9UKQ2 775 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 RAB23Q9ULC3 237 aa13.6□□□□□ -0.23
PRPF8-208ENST00000573716 EFEMP2O95967 443 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 AKAP5P24588 427 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 RCAN1P53805 252 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 NCBP1Q09161 790 aaKnown RBP13.59□□□□□ -0.23
PRPF8-208ENST00000573716 Q4G0T1 1027 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 NOTUMQ6P988 496 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 CEP57Q86XR8 500 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 HASPINQ8TF76 798 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 BRF1Q92994 677 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 DDX23Q9BUQ8 820 aaKnown RBP13.59□□□□□ -0.23
PRPF8-208ENST00000573716 EPC1Q9H2F5 836 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 NXF3Q9H4D5 531 aaKnown RBP13.59□□□□□ -0.23
PRPF8-208ENST00000573716 KLK14Q9P0G3 267 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 FBXW11Q9UKB1 542 aa13.59□□□□□ -0.23
PRPF8-208ENST00000573716 INO80B-WBP1J3KQ70 363 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 EML1O00423 815 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 NCAM2O15394 837 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 TBC1D4O60343 1298 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 TSPAN1O60635 241 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 XYLBO75191 536 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 C8AP07357 584 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 HNRNPA1P09651 372 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRPF8-208ENST00000573716 TARSP26639 723 aaKnown RBP13.58□□□□□ -0.24
PRPF8-208ENST00000573716 RFC5P40937 340 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 MAGEA9P43362 315 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 QARSP47897 775 aaKnown RBP13.58□□□□□ -0.24
PRPF8-208ENST00000573716 SPEM2Q0P670 501 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 EMC2Q15006 297 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 PPM1JQ5JR12 505 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 RTP2Q5QGT7 225 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 Q6ZUG5 572 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 EXOC8Q8IYI6 725 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 ZBTB44Q8NCP5 570 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 TCP11Q8WWU5 503 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 BORCS6Q96GS4 357 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 OSBPL6Q9BZF3 934 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 CSRNP2Q9H175 543 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 PARD6AQ9NPB6 346 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms