RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 USP27XA6NNY8 438 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 GRXCR1A8MXD5 290 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 AKR1B15C9JRZ8 316 aaPredicted RBP10.47□□□□□ -0.73
NDE1-208ENST00000573694 CETN3O15182 167 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 AKAP3O75969 853 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 RB1P06400 928 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 TPM2P07951 284 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 ZNF286BP0CG31 522 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 MAPTP10636 758 aaKnown RBP10.47□□□□□ -0.73
NDE1-208ENST00000573694 CASP14P31944 242 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 THPOP40225 353 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 NCKAP1LP55160 1127 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 MARSP56192 900 aaKnown RBP10.47□□□□□ -0.73
NDE1-208ENST00000573694 CDC42EP1Q00587 391 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 TAP1Q03518 808 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 TBC1D8BQ0IIM8 1120 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 ADAM9Q13443 819 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 FAM160B1Q5W0V3 765 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 STXBP4Q6ZWJ1 553 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 PPFIBP1Q86W92 1011 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 TRIM59Q8IWR1 403 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 SP7Q8TDD2 431 aaPredicted RBP10.47□□□□□ -0.73
NDE1-208ENST00000573694 TOP1MTQ969P6 601 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 ASB2Q96Q27 587 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 TGS1Q96RS0 853 aaKnown RBP10.47□□□□□ -0.73
NDE1-208ENST00000573694 TMX1Q9H3N1 280 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 NDST4Q9H3R1 872 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 PRDM12Q9H4Q4 367 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 AGPAT3Q9NRZ7 376 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 SPTLC3Q9NUV7 552 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 LARSQ9P2J5 1176 aaKnown RBP10.47□□□□□ -0.73
NDE1-208ENST00000573694 COL1A2P08123 1366 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 COL4A6Q14031 1691 aa10.47□□□□□ -0.73
NDE1-208ENST00000573694 PRRC2BQ5JSZ5 2229 aaKnown RBP10.46□□□□□ -0.73
NDE1-208ENST00000573694 CARNS1A5YM72 827 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 CCDC169A6NNP5 214 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 SLC16A3O15427 465 aaKnown RBP10.46□□□□□ -0.73
NDE1-208ENST00000573694 HBP1O60381 514 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 DGAT1O75907 488 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 GNA14O95837 355 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 CA3P07451 260 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 NPTX2P47972 431 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 CYP2J2P51589 502 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 STAT5BP51692 787 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 POLGP54098 1239 aaPredicted RBP10.46□□□□□ -0.73
NDE1-208ENST00000573694 DMP1Q13316 513 aaPredicted RBP10.46□□□□□ -0.73
NDE1-208ENST00000573694 TRIM14Q14142 442 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 NOLC1Q14978 699 aaKnown RBP eCLIP10.46□□□□□ -0.73
NDE1-208ENST00000573694 NFIL3Q16649 462 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 PTPROQ16827 1216 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
NDE1-208ENST00000573694 FKBP15Q5T1M5 1219 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 HAUS6Q7Z4H7 955 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 ASAP3Q8TDY4 903 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 GLG1Q92896 1179 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 ACCSQ96QU6 501 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 ERGIC2Q96RQ1 377 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 TTYH3Q9C0H2 523 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 GBP3Q9H0R5 595 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 SIK3Q9Y2K2 1263 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
NDE1-208ENST00000573694 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.46□□□□□ -0.736e-8■□□□□ 8.8
NDE1-208ENST00000573694 CHD7Q9P2D1 2997 aa10.46□□□□□ -0.74
NDE1-208ENST00000573694 SMIM35A0A1B0GVV1 85 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 TTC26A0AVF1 554 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 M0QZ92 97 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 EPHB6O15197 1021 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 TREHO43280 583 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 EPB41P11171 864 aaKnown RBP10.45□□□□□ -0.74
NDE1-208ENST00000573694 CHMP4BP1P59074 171 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 GTF2BQ00403 316 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 PPFIA1Q13136 1202 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 ALCAMQ13740 583 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 PLCB4Q15147 1175 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 TARBP2Q15633 366 aaKnown RBP10.45□□□□□ -0.74
NDE1-208ENST00000573694 ZNF484Q5JVG2 852 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 E4F1Q66K89 784 aaPredicted RBP10.45□□□□□ -0.74
NDE1-208ENST00000573694 TAS1R3Q7RTX0 852 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 SYCP3Q8IZU3 236 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 TMEM161BQ8NDZ6 487 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 ZSWIM2Q8NEG5 633 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 DBF4BQ8NFT6 615 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 LMBR1Q8WVP7 490 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 KIFAP3Q92845 792 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 PCMTD1Q96MG8 357 aaPredicted RBP10.45□□□□□ -0.74
NDE1-208ENST00000573694 PANX2Q96RD6 677 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 BAG1Q99933 345 aaPredicted RBP10.45□□□□□ -0.74
NDE1-208ENST00000573694 NIFKQ9BYG3 293 aaKnown RBP10.45□□□□□ -0.74
NDE1-208ENST00000573694 LMAN2LQ9H0V9 348 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 ST6GALNAC4Q9H4F1 302 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 DHX33Q9H6R0 707 aaKnown RBP10.45□□□□□ -0.74
NDE1-208ENST00000573694 KMT5AQ9NQR1 393 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 ABHD10Q9NUJ1 306 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 SETD4Q9NVD3 440 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 MTCH2Q9Y6C9 303 aa10.45□□□□□ -0.74
NDE1-208ENST00000573694 ANK1P16157 1881 aa10.44□□□□□ -0.74
NDE1-208ENST00000573694 PRUNE2Q8WUY3 3088 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms