RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 NXF3Q9H4D5 531 aaKnown RBP15.31■□□□□ 0.04
RPAIN-211ENST00000572174 NSUN3Q9H649 340 aaKnown RBP15.31■□□□□ 0.04
RPAIN-211ENST00000572174 CWH43Q9H720 699 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 SPG21Q9NZD8 308 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 PLAGL2Q9UPG8 496 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 ARL5CA6NH57 179 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 SFI1A8K8P3 1242 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 RFXAPO00287 272 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 FGF18O76093 207 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 MCF2P10911 925 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 AAK1Q2M2I8 961 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 SHC4Q6S5L8 630 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 CEP57L1Q8IYX8 460 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 ACO2Q99798 780 aaKnown RBP15.3■□□□□ 0.04
RPAIN-211ENST00000572174 TCHPQ9BT92 498 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 APOL6Q9BWW8 343 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 ST6GALNAC4Q9H4F1 302 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 OLFML3Q9NRN5 406 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 BRWD1Q9NSI6 2320 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 PARP2Q9UGN5 583 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 EXOC7Q9UPT5 735 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 ZDHHC9Q9Y397 364 aa15.3■□□□□ 0.04
RPAIN-211ENST00000572174 NPHP3-ACAD11A0A0J9YXS1 232 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 HNRNPDLO14979 420 aaKnown RBP15.29■□□□□ 0.04
RPAIN-211ENST00000572174 CLDN3O15551 220 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 ITGB1P05556 798 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 CMA1P23946 247 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 MLH1P40692 756 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 MATR3P43243 847 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPAIN-211ENST00000572174 LIG4P49917 911 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-211ENST00000572174 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPAIN-211ENST00000572174 SKIV2LQ15477 1246 aaKnown RBP15.29■□□□□ 0.04
RPAIN-211ENST00000572174 DYMQ7RTS9 669 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 SPRED2Q7Z698 418 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
RPAIN-211ENST00000572174 DHX58Q96C10 678 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 POLD4Q9HCU8 107 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 TLR9Q9NR96 1032 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 KBTBD4Q9NVX7 518 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 COG5Q9UP83 839 aa15.29■□□□□ 0.04
RPAIN-211ENST00000572174 GOLGA6L4A6NEF3 574 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 POLR2DO15514 142 aaKnown RBP15.28■□□□□ 0.04
RPAIN-211ENST00000572174 MYL1P05976 194 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 IDEP14735 1019 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 GRM5P41594 1212 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 BCAR1P56945 870 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 GTF2BQ00403 316 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 E2F4Q16254 413 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 NT5DC1Q5TFE4 455 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 SLFN12LQ6IEE8 588 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 CNNM4Q6P4Q7 775 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 LRRC55Q6ZSA7 311 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 SPPL3Q8TCT6 385 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 LRRC15Q8TF66 581 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 GAD1Q99259 594 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
RPAIN-211ENST00000572174 NGRNQ9NPE2 291 aaKnown RBP15.28■□□□□ 0.04
RPAIN-211ENST00000572174 PANK4Q9NVE7 773 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 ANKFY1Q9P2R3 1169 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 THEGQ9P2T0 379 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 TBX20Q9UMR3 447 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
RPAIN-211ENST00000572174 ANK1P16157 1881 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 A0A087X0B3 334 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 A0A1W2PQD8 194 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 MYMKA6NI61 221 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 MEIS3P2A8K0S8 358 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 GRM6O15303 877 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 RECQL4O94761 1208 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 POMCP01189 267 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 PIGRP01833 764 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 ALDH2P05091 517 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 THP07101 528 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 PROZP22891 400 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-211ENST00000572174 HERC4Q5GLZ8 1057 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-211ENST00000572174 TAS1R3Q7RTX0 852 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 CDR2LQ86X02 465 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-211ENST00000572174 SFR1Q86XK3 245 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 SLC39A11Q8N1S5 342 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 POF1BQ8WVV4 589 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 ACAP3Q96P50 834 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 TSPAN18Q96SJ8 248 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.04
RPAIN-211ENST00000572174 PANK2Q9BZ23 570 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 GBP3Q9H0R5 595 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 CDT1Q9H211 546 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 NRDE2Q9H7Z3 1164 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 PTPRHQ9HD43 1115 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 ALG13Q9NP73 1137 aaKnown RBP15.27■□□□□ 0.04
RPAIN-211ENST00000572174 SLC38A7Q9NVC3 462 aa15.27■□□□□ 0.04
RPAIN-211ENST00000572174 FAN1Q9Y2M0 1017 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms