RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 K7ERI5 159 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 BMP15O95972 392 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 MARCKSP29966 332 aaPredicted RBP19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 UBA7P41226 1012 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 EFNA5P52803 228 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 MAPK7Q13164 816 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 DHX8Q14562 1220 aaKnown RBP19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 TMEM119Q4V9L6 283 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 NT5DC1Q5TFE4 455 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 ATF7IP2Q5U623 682 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 SYT2Q8N9I0 419 aaPredicted RBP19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 KHSRPQ92945 711 aaKnown RBP eCLIP19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 AK8Q96MA6 479 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 ADPGKQ9BRR6 497 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 KMT5AQ9NQR1 393 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 CACNG4Q9UBN1 327 aa19.59■□□□□ 0.73
CTDNEP1-207ENST00000572043 CARNS1A5YM72 827 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 SLC16A4O15374 487 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 CLASP2O75122 1294 aaKnown RBP19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 CTSAP10619 480 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 SLC12A3P55017 1021 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 KARSQ15046 597 aaKnown RBP19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 SMAD2Q15796 467 aaKnown RBP19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 SPECC1Q5M775 1068 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 GSTCDQ8NEC7 633 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 CALML4Q96GE6 196 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 CXCL16Q9H2A7 254 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 MARCH5Q9NX47 278 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 MTMR6Q9Y217 621 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 GDAQ9Y2T3 454 aa19.58■□□□□ 0.72
CTDNEP1-207ENST00000572043 PHLPP2Q6ZVD8 1323 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 C2CD2LO14523 706 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 INPPL1O15357 1258 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 RECQL4O94761 1208 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 SRGAP2BP0DMP2 458 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 GUCY2CP25092 1073 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 DSC1Q08554 894 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 COASYQ13057 564 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 SMRP1Q8NCR6 262 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 LRRC15Q8TF66 581 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 EPHX3Q9H6B9 360 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 USP15Q9Y4E8 981 aaPredicted RBP19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 HCFC2Q9Y5Z7 792 aa19.57■□□□□ 0.72
CTDNEP1-207ENST00000572043 FSD2A1L4K1 749 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 NR1I2O75469 434 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 PLCG1P19174 1290 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 LONP1P36776 959 aaKnown RBP19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 ZP2Q05996 745 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 GRIK3Q13003 919 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 KCNC3Q14003 757 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 PTPAQ15257 358 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 FOXD4L5Q5VV16 416 aaPredicted RBP19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 ANKRD54Q6NXT1 300 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 TAS1R1Q7RTX1 841 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 ZBTB33Q86T24 672 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 HSCBQ8IWL3 235 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 ADHFE1Q8IWW8 467 aa19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 FOXD4L4Q8WXT5 416 aaPredicted RBP19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 TARS2Q9BW92 718 aaKnown RBP19.56■□□□□ 0.72
CTDNEP1-207ENST00000572043 CASTOR2A6NHX0 329 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 STX6O43752 255 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 HARSP12081 509 aaKnown RBP19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 PLS3P13797 630 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 OSTNP61366 133 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 MCM6Q14566 821 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 PTPN14Q15678 1187 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 DCAF4L1Q3SXM0 396 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 ZNF568Q3ZCX4 644 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 ARSHQ5FYA8 562 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 USP49Q70CQ1 688 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 TAS1R3Q7RTX0 852 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 GPBP1Q86WP2 473 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 SNX21Q969T3 373 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 CLIC6Q96NY7 704 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 TIPINQ9BVW5 301 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 COLEC11Q9BWP8 271 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 MRPL4Q9BYD3 311 aaKnown RBP19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 ARHGAP28Q9P2N2 729 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 CDH22Q9UJ99 828 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 TNFSF13BQ9Y275 285 aa19.55■□□□□ 0.72
CTDNEP1-207ENST00000572043 PTGESO14684 152 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 HSP90AA1P07900 732 aaKnown RBP19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 GLRA4Q5JXX5 417 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 SYCE2Q6PIF2 218 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 TMEM184AQ6ZMB5 413 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 CEP120Q8N960 986 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 HASPINQ8TF76 798 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 CASP10Q92851 521 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 EPSTI1Q96J88 318 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 B3GALT6Q96L58 329 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 USP28Q96RU2 1077 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 ACO2Q99798 780 aaKnown RBP19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 PAAF1Q9BRP4 392 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 TCHPQ9BT92 498 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 ZHX3Q9H4I2 956 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 TMEM134Q9H6X4 195 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 C17orf75Q9HAS0 396 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 BLOC1S4Q9NUP1 217 aa19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 PRKAG3Q9UGI9 489 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms