RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DENND2DQ9H6A0 471 aaPredicted RBP18.01■□□□□ 0.47
LITAF-209ENST00000571688 LRRC19Q9H756 370 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 SIGLEC16A6NMB1 481 aa18■□□□□ 0.47
LITAF-209ENST00000571688 TMEM110-MUSTN1A8MSY1 372 aa18■□□□□ 0.47
LITAF-209ENST00000571688 LMNAP02545 664 aaKnown RBP18■□□□□ 0.47
LITAF-209ENST00000571688 SSR1P43307 286 aaKnown RBP18■□□□□ 0.47
LITAF-209ENST00000571688 IL9RQ01113 521 aa18■□□□□ 0.47
LITAF-209ENST00000571688 RNF220Q5VTB9 566 aa18■□□□□ 0.47
LITAF-209ENST00000571688 SEPT14Q6ZU15 432 aa18■□□□□ 0.47
LITAF-209ENST00000571688 FBXO41Q8TF61 875 aa18■□□□□ 0.47
LITAF-209ENST00000571688 DCLRE1BQ9H816 532 aa18■□□□□ 0.47
LITAF-209ENST00000571688 ECE2O60344 883 aa18■□□□□ 0.47
LITAF-209ENST00000571688 DCTN3O75935 186 aa18■□□□□ 0.47
LITAF-209ENST00000571688 FMO5P49326 533 aa18■□□□□ 0.47
LITAF-209ENST00000571688 WDR4P57081 412 aaKnown RBP18■□□□□ 0.47
LITAF-209ENST00000571688 TNIP1Q15025 636 aa18■□□□□ 0.47
LITAF-209ENST00000571688 KYNUQ16719 465 aa18■□□□□ 0.47
LITAF-209ENST00000571688 MUM1Q2TAK8 710 aa18■□□□□ 0.47
LITAF-209ENST00000571688 SRRM1Q8IYB3 904 aaKnown RBP18■□□□□ 0.47
LITAF-209ENST00000571688 KIFAP3Q92845 792 aa18■□□□□ 0.47
LITAF-209ENST00000571688 ITFG2Q969R8 447 aa18■□□□□ 0.47
LITAF-209ENST00000571688 TRAPPC9Q96Q05 1148 aa18■□□□□ 0.47
LITAF-209ENST00000571688 TLE6Q9H808 572 aa18■□□□□ 0.47
LITAF-209ENST00000571688 DNAJC18Q9H819 358 aa18■□□□□ 0.47
LITAF-209ENST00000571688 NMRK1Q9NWW6 199 aa18■□□□□ 0.47
LITAF-209ENST00000571688 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 ABCA3Q99758 1704 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 ENTPD5O75356 428 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 RNF8O76064 485 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 ERFEQ4G0M1 354 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 SPDYAQ5MJ70 313 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 MAPKAPK5Q8IW41 473 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 SYT2Q8N9I0 419 aaPredicted RBP17.99■□□□□ 0.47
LITAF-209ENST00000571688 MORC4Q8TE76 937 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 UIMC1Q96RL1 719 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 AGPAT1Q99943 283 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 RGL1Q9NZL6 768 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 PHTF1Q9UMS5 762 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 NAALADL1Q9UQQ1 740 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 NVLO15381 856 aaKnown RBP17.99■□□□□ 0.47
LITAF-209ENST00000571688 CDH16O75309 829 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 ITIH2P19823 946 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 STAT3P40763 770 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 RASSF2P50749 326 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 PPP4CP60510 307 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 KRT17Q04695 432 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 TMEM63BQ5T3F8 832 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 RNF207Q6ZRF8 634 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 FAM186BQ8IYM0 893 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 UCMAQ8WVF2 138 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 NAP1L4Q99733 375 aaKnown RBP17.99■□□□□ 0.47
LITAF-209ENST00000571688 TRIM4Q9C037 500 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 EURLQ9NYK6 297 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 NINJ2Q9NZG7 142 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 LRCH1Q9Y2L9 728 aa17.99■□□□□ 0.47
LITAF-209ENST00000571688 TNRC6CQ9HCJ0 1690 aaKnown RBP17.98■□□□□ 0.47
LITAF-209ENST00000571688 TGFB1I1O43294 461 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 ASMTLO95671 621 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 VHLP40337 213 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
LITAF-209ENST00000571688 PSMC6P62333 389 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 KCNA1Q09470 495 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 LAMB3Q13751 1172 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 GORASP1Q9BQQ3 440 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 APEX2Q9UBZ4 518 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 TBK1Q9UHD2 729 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 THAP12O43422 761 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
LITAF-209ENST00000571688 CHRNB2P17787 502 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 PSMC2P35998 433 aaKnown RBP17.98■□□□□ 0.47
LITAF-209ENST00000571688 GPC5P78333 572 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 ADCY1Q08828 1119 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 MESDQ14696 234 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 RGS9BPQ6ZS82 235 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 CATSPER3Q86XQ3 398 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 PHC3Q8NDX5 983 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 INTS2Q9H0H0 1204 aaKnown RBP17.98■□□□□ 0.47
LITAF-209ENST00000571688 STOML1Q9UBI4 398 aa17.98■□□□□ 0.47
LITAF-209ENST00000571688 FAM47DPA6NHR8 397 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 MTA2O94776 668 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 FTLP02792 175 aaPredicted RBP17.97■□□□□ 0.47
LITAF-209ENST00000571688 GSTA2P09210 222 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 IVDP26440 423 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.478e-7■■■■■ 44.2
LITAF-209ENST00000571688 FOXB2Q5VYV0 432 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 ZNF449Q6P9G9 518 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 FAM43BQ6ZT52 329 aaPredicted RBP17.97■□□□□ 0.47
LITAF-209ENST00000571688 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 ANKRD35Q8N283 1001 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 SLC20A1Q8WUM9 679 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 BICD1Q96G01 975 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 SNF8Q96H20 258 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 RSPH10B2B2RC85 870 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 GCNT3O95395 438 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 CBX6O95503 412 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
LITAF-209ENST00000571688 RSPH10BP0C881 870 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 PTPN4P29074 926 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms