RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 TSPY4P0CV99 314 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 TSPY10P0CW01 314 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 MEF2AQ02078 507 aaPredicted RBP4.79□□□□□ -1.64
CDC27-213ENST00000571643 DPTQ07507 201 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 TERF2Q15554 542 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 C21orf62-AS1Q17RA5 79 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 GJC2Q5T442 439 aaPredicted RBP4.79□□□□□ -1.64
CDC27-213ENST00000571643 NAIF1Q69YI7 327 aaPredicted RBP4.79□□□□□ -1.64
CDC27-213ENST00000571643 UNQ6494/PRO21346Q6UXR6 183 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 Q6ZRM9 215 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 FKBP9P1Q75LS8 142 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
CDC27-213ENST00000571643 AFAP1Q8N556 730 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 GLB1L3Q8NCI6 653 aaPredicted RBP4.79□□□□□ -1.64
CDC27-213ENST00000571643 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
CDC27-213ENST00000571643 GAB3Q8WWW8 586 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 ST8SIA2Q92186 375 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 PRRX2Q99811 253 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 TRIM8Q9BZR9 551 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 CLCA2Q9UQC9 943 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 REXO2Q9Y3B8 237 aaKnown RBP4.79□□□□□ -1.64
CDC27-213ENST00000571643 ADAMTSL3P82987 1691 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 ADGBQ8N7X0 1667 aa4.79□□□□□ -1.64
CDC27-213ENST00000571643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDC27-213ENST00000571643 KIDINS220Q9ULH0 1771 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 SYCP2Q9BX26 1530 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 ARHGEF12Q9NZN5 1544 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 BCORL1Q5H9F3 1711 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 CCDC141Q6ZP82 1450 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 A0A0A6YYK5 440 aaPredicted RBP4.78□□□□□ -1.64
CDC27-213ENST00000571643 GSG1L2A8MUP6 293 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 OVOL3O00110 214 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 KDM1AO60341 852 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 ULK1O75385 1050 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 ADCYAP1R1P41586 468 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 SCNN1GP51170 649 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 RABGGTBP53611 331 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 DGCR2P98153 550 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 ACAP1Q15027 740 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 PCBP1Q15365 356 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDC27-213ENST00000571643 DHCR24Q15392 516 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 SEPT7Q16181 437 aaKnown RBP4.78□□□□□ -1.64
CDC27-213ENST00000571643 DDB1Q16531 1140 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 ZBTB41Q5SVQ8 909 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 MB21D1Q8N884 522 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 NEU4Q8WWR8 484 aaPredicted RBP4.78□□□□□ -1.64
CDC27-213ENST00000571643 SLC5A5Q92911 643 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 USP7Q93009 1102 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 MNTQ99583 582 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 SOX7Q9BT81 388 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 EPC1Q9H2F5 836 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 SLKQ9H2G2 1235 aaPredicted RBP4.78□□□□□ -1.64
CDC27-213ENST00000571643 EMC7Q9NPA0 242 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 SPTLC3Q9NUV7 552 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 BCCIPQ9P287 314 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDC27-213ENST00000571643 CNTLNQ9NXG0 1405 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 TRAPPC8Q9Y2L5 1435 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 INO80Q9ULG1 1556 aaPredicted RBP4.78□□□□□ -1.64
CDC27-213ENST00000571643 MAST1Q9Y2H9 1570 aa4.78□□□□□ -1.64
CDC27-213ENST00000571643 ATP7AQ04656 1500 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 CAMSAP2Q08AD1 1489 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 TCOF1Q13428 1488 aaKnown RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 SHANK2Q9UPX8 1470 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 SETD1BQ9UPS6 1966 aaKnown RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 KLRG2A4D1S0 409 aaPredicted RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 TRIM24O15164 1050 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 PDE8AO60658 829 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 RECQL4O94761 1208 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 LY86O95711 162 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 GYPEP15421 78 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 HNRNPMP52272 730 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDC27-213ENST00000571643 MANFP55145 182 aaKnown RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 DUSP2Q05923 314 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 PPARAQ07869 468 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 TOB2Q14106 344 aaPredicted RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 PLEKHG4Q58EX7 1191 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 DOK3Q7L591 496 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 TAS1R1Q7RTX1 841 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 FAM83AQ86UY5 434 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 PIK3C3Q8NEB9 887 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 OR14C36Q8NHC7 312 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 IL17RAQ96F46 866 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 ZNF496Q96IT1 587 aaPredicted RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 MMRN2Q9H8L6 949 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDC27-213ENST00000571643 ING1Q9UK53 422 aaPredicted RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 USP18Q9UMW8 372 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 APOBEC2Q9Y235 224 aaKnown RBP4.77□□□□□ -1.65
CDC27-213ENST00000571643 FGD6Q6ZV73 1430 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 DIP2CQ9Y2E4 1556 aa4.77□□□□□ -1.65
CDC27-213ENST00000571643 XDHP47989 1333 aa4.76□□□□□ -1.65
CDC27-213ENST00000571643 ARID4BQ4LE39 1312 aaPredicted RBP4.76□□□□□ -1.65
CDC27-213ENST00000571643 A2MP01023 1474 aa4.76□□□□□ -1.65
CDC27-213ENST00000571643 TMEM191CA6NGB0 347 aa4.76□□□□□ -1.65
CDC27-213ENST00000571643 ZEB2O60315 1214 aa4.76□□□□□ -1.65
CDC27-213ENST00000571643 LTA4HP09960 611 aaKnown RBP4.76□□□□□ -1.65
CDC27-213ENST00000571643 NCLP19338 710 aaKnown RBP4.76□□□□□ -1.65
CDC27-213ENST00000571643 CD69Q07108 199 aa4.76□□□□□ -1.65
CDC27-213ENST00000571643 ATP13A4Q4VNC1 1196 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms