RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 EFNA5P52803 228 aa33.46■■■□□ 2.95
CTDNEP1-206ENST00000571409 PTPN14Q15678 1187 aa33.46■■■□□ 2.95
CTDNEP1-206ENST00000571409 SUSD6Q92537 303 aa33.46■■■□□ 2.95
CTDNEP1-206ENST00000571409 ADPGKQ9BRR6 497 aa33.46■■■□□ 2.95
CTDNEP1-206ENST00000571409 RUSC1Q9BVN2 902 aa33.46■■■□□ 2.95
CTDNEP1-206ENST00000571409 ZMYM2Q9UBW7 1377 aa33.46■■■□□ 2.95
CTDNEP1-206ENST00000571409 HIP1RO75146 1068 aa33.45■■■□□ 2.95
CTDNEP1-206ENST00000571409 HOXB8P17481 243 aaPredicted RBP33.45■■■□□ 2.95
CTDNEP1-206ENST00000571409 HYIQ5T013 277 aa33.45■■■□□ 2.95
CTDNEP1-206ENST00000571409 RINT1Q6NUQ1 792 aa33.45■■■□□ 2.95
CTDNEP1-206ENST00000571409 RPS6KC1Q96S38 1066 aa33.45■■■□□ 2.95
CTDNEP1-206ENST00000571409 NR1I2O75469 434 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 ALADP13716 330 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 PEX3P56589 373 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 GRIK3Q13003 919 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 TMEM31Q5JXX7 168 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 BRAPQ7Z569 592 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 DAW1Q8N136 415 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 PNMA5Q96PV4 448 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 PHF7Q9BWX1 381 aaPredicted RBP33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 NT5C3AQ9H0P0 336 aa33.44■■■□□ 2.94
CTDNEP1-206ENST00000571409 CCDC169A6NNP5 214 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 COL9A1P20849 921 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 TPRNQ4KMQ1 711 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 EEF1DP3Q658K8 133 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 C1orf186Q6ZWK4 172 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 PLIN2Q99541 437 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 C11orf16Q9NQ32 467 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 SNTG2Q9NY99 539 aa33.43■■■□□ 2.94
CTDNEP1-206ENST00000571409 VPS37CA5D8V6 355 aaPredicted RBP33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 FAM86C2PA6NEL3 165 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 K7ERI5 159 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 DCXO43602 365 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 SOD2P04179 222 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 NPTX2P47972 431 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 DMP1Q13316 513 aaPredicted RBP33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 CBX2Q14781 532 aaPredicted RBP33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 CDK5RAP3Q96JB5 506 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 DRC1Q96MC2 740 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 LRFN3Q9BTN0 628 aa33.42■■■□□ 2.94
CTDNEP1-206ENST00000571409 F8W810 466 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 GPR37L1O60883 481 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 MAPK7Q13164 816 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 NT5DC1Q5TFE4 455 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 KCTD17Q8N5Z5 321 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 HERC2P3Q9BVR0 1158 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 COLEC11Q9BWP8 271 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 EMILIN2Q9BXX0 1053 aa33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 MRPL17Q9NRX2 175 aaKnown RBP33.41■■■□□ 2.94
CTDNEP1-206ENST00000571409 PHLPP2Q6ZVD8 1323 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 LOC730098B7Z3J9 87 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 RECQL4O94761 1208 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 URODP06132 367 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 EPCAMP16422 314 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 PDCP20941 246 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 DCAF4L1Q3SXM0 396 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 ATF7IP2Q5U623 682 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 TAS1R1Q7RTX1 841 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 RNF135Q8IUD6 432 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 SLC22A17Q8WUG5 538 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 RPGRIP1Q96KN7 1286 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 KLHL5Q96PQ7 755 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 TIPINQ9BVW5 301 aa33.4■■■□□ 2.94
CTDNEP1-206ENST00000571409 C2CD2LO14523 706 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 LILRB3O75022 631 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 BMP15O95972 392 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 CABP7Q86V35 215 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 PPFIBP1Q86W92 1011 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 RNF168Q8IYW5 571 aaPredicted RBP33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 SYT2Q8N9I0 419 aaPredicted RBP33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 AK8Q96MA6 479 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 KMT5AQ9NQR1 393 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 DZANK1Q9NVP4 752 aa33.39■■■□□ 2.94
CTDNEP1-206ENST00000571409 EFEMP2O95967 443 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 CNPP09543 421 aaKnown RBP33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 GUCY2CP25092 1073 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 KLRC2P26717 231 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 ITIH3Q06033 890 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 RAD51AP2Q09MP3 1159 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 TMEM119Q4V9L6 283 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 CES5AQ6NT32 575 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 ADAM7Q9H2U9 754 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 TMEM134Q9H6X4 195 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 C17orf75Q9HAS0 396 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 ARHGAP28Q9P2N2 729 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 MUTYHQ9UIF7 546 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 CDH22Q9UJ99 828 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 GDAQ9Y2T3 454 aa33.38■■■□□ 2.93
CTDNEP1-206ENST00000571409 SFI1A8K8P3 1242 aa33.37■■■□□ 2.93
CTDNEP1-206ENST00000571409 PTGESO14684 152 aa33.37■■■□□ 2.93
CTDNEP1-206ENST00000571409 SF3A1Q15459 793 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-206ENST00000571409 RABGGTAQ92696 567 aa33.37■■■□□ 2.93
CTDNEP1-206ENST00000571409 CACNG4Q9UBN1 327 aa33.37■■■□□ 2.93
CTDNEP1-206ENST00000571409 TNFSF13BQ9Y275 285 aa33.37■■■□□ 2.93
CTDNEP1-206ENST00000571409 SSX2IPQ9Y2D8 614 aa33.37■■■□□ 2.93
CTDNEP1-206ENST00000571409 PLA2G4BP0C869 781 aa33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 GLUD2P49448 558 aa33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 SLC12A3P55017 1021 aa33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 TUSC3Q13454 348 aa33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 RARS2Q5T160 578 aaKnown RBP33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms