RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MAP7D2Q96T17 732 aa14.73□□□□□ -0.05
CCDC40-205ENST00000571028 SCAND2PQ9GZW5 306 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-205ENST00000571028 NT5C3AQ9H0P0 336 aa14.73□□□□□ -0.05
CCDC40-205ENST00000571028 ELAC1Q9H777 363 aaKnown RBP14.73□□□□□ -0.05
CCDC40-205ENST00000571028 USTQ9Y2C2 406 aa14.73□□□□□ -0.05
CCDC40-205ENST00000571028 DCHS1Q96JQ0 3298 aa14.73□□□□□ -0.05
CCDC40-205ENST00000571028 VPS13AQ96RL7 3174 aa14.73□□□□□ -0.05
CCDC40-205ENST00000571028 MYH15Q9Y2K3 1946 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 KAT6AQ92794 2004 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 C2orf71A6NGG8 1288 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 EOMESO95936 686 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 XRCC6P12956 609 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC40-205ENST00000571028 MUTP22033 750 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 DNM2P50570 870 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 MCM6Q14566 821 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 PUM1Q14671 1186 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC40-205ENST00000571028 TMEM119Q4V9L6 283 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 AXDND1Q5T1B0 1012 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-205ENST00000571028 PADI6Q6TGC4 694 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 SIX5Q8N196 739 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 RNF169Q8NCN4 708 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 MTRQ99707 1265 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 CCSER1Q9C0I3 900 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 FAM13BQ9NYF5 915 aa14.72□□□□□ -0.05
CCDC40-205ENST00000571028 SUCLA2Q9P2R7 463 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-205ENST00000571028 GVINP1Q7Z2Y8 2422 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 CLASP2O75122 1294 aaKnown RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 MAFO75444 373 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 DGAT1O75907 488 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 PLA2G4BP0C869 781 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 STAT6P42226 847 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 RAD51AP2Q09MP3 1159 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 TDGQ13569 410 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 KIZQ2M2Z5 673 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 HYIQ5T013 277 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 ZC3H14Q6PJT7 736 aaKnown RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 OTOP3Q7RTS5 596 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 RHPN2Q8IUC4 686 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 C12orf76Q8N812 135 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 TMEM40Q8WWA1 233 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 NLRP7Q8WX94 980 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 DHX58Q96C10 678 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 NLRP4Q96MN2 994 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 OSMRQ99650 979 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 JPH2Q9BR39 696 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 POLR3FQ9H1D9 316 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 DHX33Q9H6R0 707 aaKnown RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 CDHR5Q9HBB8 845 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 GPRC5CQ9NQ84 441 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 XPNPEP1Q9NQW7 623 aa14.71□□□□□ -0.05
CCDC40-205ENST00000571028 MORC2Q9Y6X9 1032 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-205ENST00000571028 A0A087X0B3 334 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 GOLGA6L4A6NEF3 574 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 PI15O43692 258 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 CXCL14O95715 111 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 ZSCAN20P17040 1043 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-205ENST00000571028 ALDH7A1P49419 539 aaKnown RBP14.7□□□□□ -0.06
CCDC40-205ENST00000571028 CRYBB1P53674 252 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-205ENST00000571028 NLRP11P59045 1033 aaKnown RBP14.7□□□□□ -0.06
CCDC40-205ENST00000571028 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-205ENST00000571028 CCDC149Q6ZUS6 474 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 KSR1Q8IVT5 923 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 EXOC8Q8IYI6 725 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 LRRC15Q8TF66 581 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 TCP11Q8WWU5 503 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 RAD54LQ92698 747 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 TMEM169Q96HH4 297 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 CASD1Q96PB1 797 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 RUSC1Q9BVN2 902 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 BLOC1S4Q9NUP1 217 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 PPME1Q9Y570 386 aa14.7□□□□□ -0.06
CCDC40-205ENST00000571028 IGKV6-21A0A0C4DH24 114 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 NPHP3-ACAD11A0A0J9YXS1 232 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 A0A1B0GVL5 298 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 KRT18P05783 430 aaKnown RBP14.69□□□□□ -0.06
CCDC40-205ENST00000571028 SRGAP2CP0DJJ0 459 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 CYP11B2P19099 503 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 FAM189BP81408 668 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 CCDC73Q6ZRK6 1079 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 LRRC55Q6ZSA7 311 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 FAM228AQ86W67 206 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 GPBP1Q86WP2 473 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 LINC01465Q8N7H1 131 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 PRPF31Q8WWY3 499 aaKnown RBP14.69□□□□□ -0.06
CCDC40-205ENST00000571028 PSPC1Q8WXF1 523 aaKnown RBP14.69□□□□□ -0.06
CCDC40-205ENST00000571028 DUSP12Q9UNI6 340 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 R4GN57 208 aa14.69□□□□□ -0.06
CCDC40-205ENST00000571028 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 A0A087WZ62 844 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 POLR2DO15514 142 aaKnown RBP14.68□□□□□ -0.06
CCDC40-205ENST00000571028 SLC26A4O43511 780 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 CSDE1O75534 798 aaKnown RBP14.68□□□□□ -0.06
CCDC40-205ENST00000571028 NPR3P17342 541 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 GIT2Q14161 759 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 RESP18Q5W5W9 173 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 ADALQ6DHV7 355 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 RINT1Q6NUQ1 792 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 TMC5Q6UXY8 1006 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms