RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DAPK1P53355 1430 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 UBE2QL1A1L167 161 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 ENPP1P22413 925 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 MEF2AQ02078 507 aaPredicted RBP5.52□□□□□ -1.53
NUP88-202ENST00000570937 HHEXQ03014 270 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 PPARAQ07869 468 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 CT83Q5H943 113 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 SPDYAQ5MJ70 313 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 RNF219Q5W0B1 726 aaPredicted RBP5.52□□□□□ -1.53
NUP88-202ENST00000570937 KRT40Q6A162 431 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 FAM111BQ6SJ93 734 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 LMBR1LQ6UX01 489 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 LHFPL2Q6ZUX7 228 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 SPATS2Q86XZ4 545 aaKnown RBP5.52□□□□□ -1.53
NUP88-202ENST00000570937 GLB1L2Q8IW92 636 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 D2HGDHQ8N465 521 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 ZNF808Q8N4W9 903 aaPredicted RBP5.52□□□□□ -1.53
NUP88-202ENST00000570937 WDR66Q8TBY9 1149 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 SH3RF3Q8TEJ3 882 aaPredicted RBP5.52□□□□□ -1.53
NUP88-202ENST00000570937 LMBR1Q8WVP7 490 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 TMEM176AQ96HP8 235 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 TCF25Q9BQ70 676 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 ENKD1Q9H0I2 346 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 SH3BP1Q9Y3L3 701 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 CDY2AQ9Y6F7 541 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 ADGBQ8N7X0 1667 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 ZMYM3Q14202 1370 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 TCOF1Q13428 1488 aaKnown RBP5.51□□□□□ -1.53
NUP88-202ENST00000570937 ABCC5O15440 1437 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 K7ESF4 209 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 NRP1O14786 923 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 MATN3O15232 486 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 DNAJC6O75061 913 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 ALDH1A2O94788 518 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 TNFRSF1AP19438 455 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 WNT3AP56704 352 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 TMPRSS15P98073 1019 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 SPIDRQ14159 915 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 PUM1Q14671 1186 aaKnown RBP eCLIP5.51□□□□□ -1.53
NUP88-202ENST00000570937 UGT8Q16880 541 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 SPTY2D1Q68D10 685 aaPredicted RBP5.51□□□□□ -1.53
NUP88-202ENST00000570937 IQSEC1Q6DN90 963 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 RAX2Q96IS3 184 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 PAWRQ96IZ0 340 aaKnown RBP5.51□□□□□ -1.53
NUP88-202ENST00000570937 FAM126AQ9BYI3 521 aaPredicted RBP5.51□□□□□ -1.53
NUP88-202ENST00000570937 KCTD10Q9H3F6 313 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 VTA1Q9NP79 307 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 TLR9Q9NR96 1032 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 RCAN3Q9UKA8 241 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 KANK1Q14678 1352 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.51□□□□□ -1.53
NUP88-202ENST00000570937 KIF15Q9NS87 1388 aa5.51□□□□□ -1.53
NUP88-202ENST00000570937 MAST1Q9Y2H9 1570 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 FER1L4A9Z1Z3 1794 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 CYP27B1O15528 508 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 LPLP06858 475 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 LTA4HP09960 611 aaKnown RBP5.5□□□□□ -1.53
NUP88-202ENST00000570937 ACRV1P26436 265 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 LGALS4P56470 323 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 MRPS9P82933 396 aaKnown RBP5.5□□□□□ -1.53
NUP88-202ENST00000570937 MGAT5Q09328 741 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 C19orf54Q5BKX5 351 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 RNF187Q5TA31 235 aaPredicted RBP5.5□□□□□ -1.53
NUP88-202ENST00000570937 MFSD5Q6N075 450 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 SPRED1Q7Z699 444 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 ANKRD35Q8N283 1001 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 EAF2Q96CJ1 260 aaPredicted RBP5.5□□□□□ -1.53
NUP88-202ENST00000570937 AURKAIP1Q9NWT8 199 aaPredicted RBP5.5□□□□□ -1.53
NUP88-202ENST00000570937 ING3Q9NXR8 418 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 PLXNC1O60486 1568 aa5.5□□□□□ -1.53
NUP88-202ENST00000570937 RIMS1Q86UR5 1692 aaKnown RBP5.5□□□□□ -1.53
NUP88-202ENST00000570937 NPATQ14207 1427 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 NCOA1Q15788 1441 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 ERBINQ96RT1 1412 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 DUOX2Q9NRD8 1548 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 FAM135AQ9P2D6 1515 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 CAPN14A8MX76 684 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 PLSCR1O15162 318 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 PRKD3O94806 890 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 HIBADHP31937 336 aaKnown RBP5.49□□□□□ -1.53
NUP88-202ENST00000570937 NPEPPSP55786 919 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.49□□□□□ -1.53
NUP88-202ENST00000570937 RNF207Q6ZRF8 634 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 SGMS1Q86VZ5 419 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 THEMISQ8N1K5 641 aaPredicted RBP5.49□□□□□ -1.53
NUP88-202ENST00000570937 MSL3Q8N5Y2 521 aaKnown RBP5.49□□□□□ -1.53
NUP88-202ENST00000570937 MIEF2Q96C03 454 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 HECAQ9UBI9 543 aaPredicted RBP5.49□□□□□ -1.53
NUP88-202ENST00000570937 MCM8Q9UJA3 840 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 ROCK1Q13464 1354 aa5.49□□□□□ -1.53
NUP88-202ENST00000570937 UHRF1BP1Q6BDS2 1440 aa5.48□□□□□ -1.53
NUP88-202ENST00000570937 DNMT1P26358 1616 aaKnown RBP5.48□□□□□ -1.53
NUP88-202ENST00000570937 SIGLEC1Q9BZZ2 1709 aa5.48□□□□□ -1.53
NUP88-202ENST00000570937 GOLGA8AA7E2F4 631 aa5.48□□□□□ -1.53
NUP88-202ENST00000570937 TMEM127O75204 238 aa5.48□□□□□ -1.53
NUP88-202ENST00000570937 ERVK-21P61565 698 aa5.48□□□□□ -1.53
NUP88-202ENST00000570937 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
NUP88-202ENST00000570937 FKBP15Q5T1M5 1219 aa5.48□□□□□ -1.53
NUP88-202ENST00000570937 KCNK18Q7Z418 384 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms