RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 DZANK1Q9NVP4 752 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 KANSL3Q9P2N6 904 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 VPS13AQ96RL7 3174 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 TEX28O15482 410 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 ALDH2P05091 517 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 ASGR2P07307 311 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 MYBP10242 640 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 RPA1P27694 616 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 OR1G1P47890 313 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 IL17AQ16552 155 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 EEF1DP3Q658K8 133 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 CES5AQ6NT32 575 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 NOSTRINQ8IVI9 506 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 KREMEN2Q8NCW0 462 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 FAM193BQ96PV7 902 aaPredicted RBP15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 RPS6KC1Q96S38 1066 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 GPR62Q9BZJ7 368 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 GIT1Q9Y2X7 761 aa15.34■□□□□ 0.05
GTF3C1-211ENST00000569653 PP2D1A8MPX8 630 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 PTGESO14684 152 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 CD2BP2O95400 341 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 CYP11B2P19099 503 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 MTHFRP42898 656 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 GIT2Q14161 759 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 SAFBQ15424 915 aaKnown RBP eCLIP15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 FAM187BQ17R55 369 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 GPR149Q86SP6 731 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 CCDC43Q96MW1 224 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 NECTIN4Q96NY8 510 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 NACC1Q96RE7 527 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 UBN1Q9NPG3 1134 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 CHST7Q9NS84 486 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 PCDHB6Q9Y5E3 794 aa15.33■□□□□ 0.04
GTF3C1-211ENST00000569653 CARNS1A5YM72 827 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 N4BP1O75113 896 aaKnown RBP15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 U2AF2P26368 475 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■□□ 15.1
GTF3C1-211ENST00000569653 KLRC2P26717 231 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 GLUD2P49448 558 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.046e-7■■■□□ 15.7
GTF3C1-211ENST00000569653 DSG1Q02413 1049 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 NAB2Q15742 525 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 CABP7Q86V35 215 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 FBXL6Q8N531 539 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 MFSD14AQ96MC6 490 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 SFXN1Q9H9B4 322 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 RXFP1Q9HBX9 757 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 MAN1C1Q9NR34 630 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 MRPL17Q9NRX2 175 aaKnown RBP15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 MYH11P35749 1972 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 NOTCH4Q99466 2003 aa15.32■□□□□ 0.04
GTF3C1-211ENST00000569653 PDCD11Q14690 1871 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 URODP06132 367 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 SPATA31D3P0C874 917 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 RPL17P18621 184 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 RBM25P49756 843 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 HMGN5P82970 282 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 TCF15Q12870 199 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 ORC2Q13416 577 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 BMS1Q14692 1282 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 NT5DC1Q5TFE4 455 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 FUT10Q6P4F1 479 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 SPATA31D4Q6ZUB0 917 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 KCNK18Q7Z418 384 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 ALYREFQ86V81 257 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 DAW1Q8N136 415 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 ZNF707Q96C28 371 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 ZSCAN31Q96LW9 406 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 RIPOR3Q96MK2 946 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 MMTAG2Q9BU76 263 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 BHMT2Q9H2M3 363 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 SH2B1Q9NRF2 756 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 PRMT7Q9NVM4 692 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 SNTG2Q9NY99 539 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 PARP2Q9UGN5 583 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 LIMD1Q9UGP4 676 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 NR2E1Q9Y466 385 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 ZMYM2Q9UBW7 1377 aa15.31■□□□□ 0.04
GTF3C1-211ENST00000569653 WDR87Q6ZQQ6 2873 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 MYO15AQ9UKN7 3530 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 ARHGEF35A5YM69 484 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 CASTOR2A6NHX0 329 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 CITO14578 2027 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 RFPL2O75678 378 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 RECQL4O94761 1208 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 PRKCBP05771 671 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 CDC25AP30304 524 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 TRAPPC10P48553 1259 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 GRIK3Q13003 919 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 PTGDRQ13258 359 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 RTP2Q5QGT7 225 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 ATAT1Q5SQI0 421 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 PRSS55Q6UWB4 352 aaPredicted RBP15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 PPFIBP1Q86W92 1011 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 ZDHHC14Q8IZN3 488 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms