RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 EIF4BP23588 611 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 FCARP24071 287 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 PXNP49023 591 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 RIPPLY3P57055 190 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 GRM2Q14416 872 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 KARSQ15046 597 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 POTEHQ6S545 545 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 GLB1LQ6UWU2 654 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 NLRX1Q86UT6 975 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF710Q8N1W2 664 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF513Q8N8E2 541 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 PIP4K2CQ8TBX8 421 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 KIF1BPQ96EK5 621 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 CDHR1Q96JP9 859 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 GBP3Q9H0R5 595 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 C1orf115Q9H7X2 142 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 CHST7Q9NS84 486 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 FBXW11Q9UKB1 542 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 SRPK3Q9UPE1 567 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 NAV3Q8IVL0 2385 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 COL1A2P08123 1366 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 ARNTLO00327 626 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 IPO8O15397 1037 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 RNF113AO15541 343 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 HBP1O60381 514 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 XYLBO75191 536 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 DDHD2O94830 711 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 SKIP12755 728 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 PSMC3P17980 439 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 GDI1P31150 447 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 PHKA2P46019 1235 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 SLC26A2P50443 739 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 STAT5BP51692 787 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 CYP4F3Q08477 520 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 CCINQ13939 588 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 PABPC1LQ4VXU2 614 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 ASPRV1Q53RT3 343 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 PPM1LQ5SGD2 360 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 PCNX4Q63HM2 1172 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 CAMKK1Q8N5S9 505 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 KBTBD3Q8NAB2 608 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 GPRASP2Q96D09 838 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 MTMR8Q96EF0 704 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 WBP1Q96G27 269 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 C8orf33Q9H7E9 229 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 ZFP14Q9HCL3 533 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 AVENQ9NQS1 362 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 MARCH5Q9NX47 278 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 MRPS23Q9Y3D9 190 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 BOD1L1Q8NFC6 3051 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 PLXND1Q9Y4D7 1925 aa7.56□□□□□ -1.2
HERPUD1-217ENST00000569429 MYO16Q9Y6X6 1858 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 TLN1Q9Y490 2541 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 PCDH15Q96QU1 1955 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 CENPEQ02224 2701 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 CCL16O15467 120 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF862O60290 1169 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 PPP1R11O60927 126 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF623O75123 536 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 VTNP04004 478 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 C8AP07357 584 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 CREMQ03060 361 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 LIN9Q5TKA1 542 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 PMS2CLQ68D20 193 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 C11orf74Q86VG3 221 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 DEPDC1BQ8WUY9 529 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 ING5Q8WYH8 240 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 LPPQ93052 612 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 MCRS1Q96EZ8 462 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 FCRL3Q96P31 734 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 FAM193BQ96PV7 902 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 VAT1LQ9HCJ6 419 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 CHST12Q9NRB3 414 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 DNMT3BQ9UBC3 853 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 POLIQ9UNA4 740 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 PCNX1Q96RV3 2341 aa7.55□□□□□ -1.2
HERPUD1-217ENST00000569429 HELZP42694 1942 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 MYBPHLA2RUH7 354 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ZBTB42B2RXF5 422 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 B4E1Z4 1266 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ERVH48-1M5A8F1 160 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ZBTB5O15062 677 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 DHX16O60231 1041 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 FTH1P19P0C7X4 201 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 GP1BBP13224 206 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ITPKBP27987 946 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF76P36508 570 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 MAPK8P45983 427 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 NLRP11P59045 1033 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 TRAF1Q13077 416 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 TRIP6Q15654 476 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF484Q5JVG2 852 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 CEP85Q6P2H3 762 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 TXNDC11Q6PKC3 985 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 VITQ6UXI7 678 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 TMPRSS7Q7RTY8 843 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms