RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 KIAA0895Q8NCT3 520 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 SMG8Q8ND04 991 aaKnown RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 ERCC4Q92889 916 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 ZBTB45Q96K62 511 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 GSDMAQ96QA5 445 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 PBX4Q9BYU1 374 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 NUP62CLQ9H1M0 184 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 CLSTN2Q9H4D0 955 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 HES2Q9Y543 173 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 PCDHA5Q9Y5H7 936 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 KIAA1671Q9BY89 1806 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 RALGAPA2Q2PPJ7 1873 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 TRIOBPQ9H2D6 2365 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 TBKBP1A7MCY6 615 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 DNAJB2P25686 324 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 PBX2P40425 430 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 HTRA4P83105 476 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-217ENST00000569263 MCL1Q07820 350 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 STK4Q13043 487 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 BTG3Q14201 252 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-217ENST00000569263 HABP4Q5JVS0 413 aaKnown RBP14.28□□□□□ -0.12
CNOT1-217ENST00000569263 SLFN12LQ6IEE8 588 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 EPM2AIP1Q7L775 607 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-217ENST00000569263 THNSL1Q8IYQ7 743 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 CMTR2Q8IYT2 770 aaKnown RBP14.28□□□□□ -0.12
CNOT1-217ENST00000569263 CRIPAKQ8N1N5 446 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 URGCPQ8TCY9 931 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 GPT2Q8TD30 523 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 HELQQ8TDG4 1101 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 SCFD1Q8WVM8 642 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 CCDC94Q9BW85 323 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-217ENST00000569263 TMEM117Q9H0C3 514 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 RSAD1Q9HA92 442 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 PTPRHQ9HD43 1115 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 UBN1Q9NPG3 1134 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 PARP2Q9UGN5 583 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 INPP5FQ9Y2H2 1132 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
CNOT1-217ENST00000569263 ZMYM2Q9UBW7 1377 aa14.27□□□□□ -0.12
CNOT1-217ENST00000569263 MEIS3P2A8K0S8 358 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 TISP43B9A030 160 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 ANKRD63C9JTQ0 380 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 ABLIM1O14639 778 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 CA3P07451 260 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 MYOGP15173 224 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 PTMSP20962 102 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 AKAP5P24588 427 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 GRM5P41594 1212 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.13
CNOT1-217ENST00000569263 OSTNP61366 133 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 CLLU1OSQ5K130 101 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 SLC39A4Q6P5W5 647 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 AGMOQ6ZNB7 445 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 HS2ST1Q7LGA3 356 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 LRRC43Q8N309 656 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 FIBCD1Q8N539 461 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 ZNF507Q8TCN5 953 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 RSPH1Q8WYR4 309 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 POMGNT1Q8WZA1 660 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 TIFAQ96CG3 184 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 ZNF689Q96CS4 500 aaPredicted RBP14.27□□□□□ -0.13
CNOT1-217ENST00000569263 RPS6KC1Q96S38 1066 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 MRPL9Q9BYD2 267 aaKnown RBP14.27□□□□□ -0.13
CNOT1-217ENST00000569263 GTPBP4Q9BZE4 634 aaKnown RBP14.27□□□□□ -0.13
CNOT1-217ENST00000569263 GBP3Q9H0R5 595 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 NKX2-4Q9H2Z4 354 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 RNF19AQ9NV58 838 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 SNTG2Q9NY99 539 aa14.27□□□□□ -0.13
CNOT1-217ENST00000569263 YBX2Q9Y2T7 364 aaKnown RBP14.27□□□□□ -0.13
CNOT1-217ENST00000569263 LCHNA4D1U4 455 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 OGTO15294 1046 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 RECQL4O94761 1208 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 MLH1P40692 756 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 KYAT1Q16773 422 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 KNOP1Q1ED39 458 aaKnown RBP14.26□□□□□ -0.13
CNOT1-217ENST00000569263 SPOUT1Q5T280 376 aaKnown RBP14.26□□□□□ -0.13
CNOT1-217ENST00000569263 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
CNOT1-217ENST00000569263 PPP2R2DQ66LE6 453 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 CEP120Q8N960 986 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 SPATA20Q8TB22 786 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 ACAP3Q96P50 834 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 IKZF4Q9H2S9 585 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 SLC28A3Q9HAS3 691 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 RC3H2Q9HBD1 1191 aaKnown RBP14.26□□□□□ -0.13
CNOT1-217ENST00000569263 TOPORSQ9NS56 1045 aaPredicted RBP14.26□□□□□ -0.13
CNOT1-217ENST00000569263 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 AGO2Q9UKV8 859 aaKnown RBP14.26□□□□□ -0.13
CNOT1-217ENST00000569263 GIT1Q9Y2X7 761 aa14.26□□□□□ -0.13
CNOT1-217ENST00000569263 TRIP11Q15643 1979 aa14.25□□□□□ -0.13
CNOT1-217ENST00000569263 PDCD11Q14690 1871 aaKnown RBP14.25□□□□□ -0.13
CNOT1-217ENST00000569263 A0A0B4J269 797 aa14.25□□□□□ -0.13
CNOT1-217ENST00000569263 BIN1O00499 593 aa14.25□□□□□ -0.13
CNOT1-217ENST00000569263 SOX1O00570 391 aaPredicted RBP14.25□□□□□ -0.13
CNOT1-217ENST00000569263 GARTP22102 1010 aa14.25□□□□□ -0.13
CNOT1-217ENST00000569263 HOXD13P35453 343 aa14.25□□□□□ -0.13
CNOT1-217ENST00000569263 RNASELQ05823 741 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms