RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TMX1Q9H3N1 280 aa6.77□□□□□ -1.33
CDH13-212ENST00000569144 CWH43Q9H720 699 aa6.77□□□□□ -1.33
CDH13-212ENST00000569144 JMJD4Q9H9V9 463 aa6.77□□□□□ -1.33
CDH13-212ENST00000569144 TYW1Q9NV66 732 aaKnown RBP6.77□□□□□ -1.33
CDH13-212ENST00000569144 DZANK1Q9NVP4 752 aa6.77□□□□□ -1.33
CDH13-212ENST00000569144 ABI2Q9NYB9 513 aaPredicted RBP6.77□□□□□ -1.33
CDH13-212ENST00000569144 TMEM63CQ9P1W3 806 aa6.77□□□□□ -1.33
CDH13-212ENST00000569144 WNT16Q9UBV4 365 aa6.77□□□□□ -1.33
CDH13-212ENST00000569144 DDX19BQ9UMR2 479 aa6.77□□□□□ -1.33
CDH13-212ENST00000569144 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 KDM3AQ9Y4C1 1321 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 MYH7BA7E2Y1 1941 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 C2orf71A6NGG8 1288 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 SOWAHDA6NJG2 315 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 PRR5-ARHGAP8B1AHC4 643 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 GCOM1H8Y6P7 765 aaPredicted RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 GNB5O14775 395 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 DHX16O60231 1041 aaKnown RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 KINO60870 393 aaKnown RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 CLASP2O75122 1294 aaKnown RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 WEE2P0C1S8 567 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 POLR2MP0CAP2 368 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 SP9P0CG40 484 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 PDIA4P13667 645 aaKnown RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 HOXA13P31271 388 aaPredicted RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 SOX18P35713 384 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 TCF7P36402 384 aaPredicted RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 MRPS9P82933 396 aaKnown RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 ARHGAP8P85298 464 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 LMNB2Q03252 620 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 KRT17Q04695 432 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 KCNA1Q09470 495 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 KCNMA1Q12791 1236 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 FAM102BQ5T8I3 360 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 PSAPL1Q6NUJ1 521 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 XRRA1Q6P2D8 792 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 C20orf204Q6ZNR8 217 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 CCDC149Q6ZUS6 474 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 OTOP3Q7RTS5 596 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 MRPL43Q8N983 215 aaKnown RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 OR13H1Q8NG92 308 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 RTKNQ9BST9 563 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 FAM49AQ9H0Q0 323 aaPredicted RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 KCNK12Q9HB15 430 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 VAT1LQ9HCJ6 419 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 JPH1Q9HDC5 661 aaPredicted RBP6.76□□□□□ -1.33
CDH13-212ENST00000569144 RGS18Q9NS28 235 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 C1orf112Q9NSG2 853 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 ERAP1Q9NZ08 941 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 IGSF9Q9P2J2 1179 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 TELO2Q9Y4R8 837 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 PCDHA1Q9Y5I3 950 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 FRYLO94915 3013 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 ZMYM6O95789 1325 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 TTC41PQ6P2S7 1318 aa6.76□□□□□ -1.33
CDH13-212ENST00000569144 EP300Q09472 2414 aaPredicted RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 DENND3A2RUS2 1198 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 KRBA1A5PL33 1030 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 RRN3P2A6NIE6 340 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 C9IYK1 514 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 PIK3R2O00459 728 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 MGEA5O60502 916 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 PPP1R11O60927 126 aaPredicted RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 FGAP02671 866 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 PARP1P09874 1014 aaKnown RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 IBSPP21815 317 aaPredicted RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 MARK3P27448 753 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 NT5C2P49902 561 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 IGBP1P78318 339 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 SP4Q02446 784 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 TMEM62Q0P6H9 643 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 CCDC178Q5BJE1 867 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 ELMSAN1Q6PJG2 1045 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 KCNT2Q6UVM3 1135 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 MFSD6Q6ZSS7 791 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 SLC24A5Q71RS6 500 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 C1orf210Q8IVY1 113 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 C12orf76Q8N812 135 aaPredicted RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 GIMAP8Q8ND71 665 aaPredicted RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 PI4K2BQ8TCG2 481 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 ESR2Q92731 530 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 MTMR8Q96EF0 704 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 CHAMP1Q96JM3 812 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 ZNF558Q96NG5 402 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 ZKSCAN3Q9BRR0 538 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 CELF4Q9BZC1 486 aaKnown RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 TMEM117Q9H0C3 514 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 CHMP4BQ9H444 224 aaKnown RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 SUV39H2Q9H5I1 410 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 ELAC1Q9H777 363 aaKnown RBP6.75□□□□□ -1.33
CDH13-212ENST00000569144 KAT14Q9H8E8 782 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 ATP6V0A4Q9HBG4 840 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 TMEM161AQ9NX61 479 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 DLGAP2Q9P1A6 1054 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 NCDNQ9UBB6 729 aa6.75□□□□□ -1.33
CDH13-212ENST00000569144 BRPF3Q9ULD4 1205 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms