RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 HEY2Q9UBP5 337 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 TECPR2O15040 1411 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 HNRNPCP07910 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
PALB2-206ENST00000568219 TMEM253P0C7T8 217 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 NLRP9Q7RTR0 991 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 RASSF3Q86WH2 238 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 ST13P4Q8IZP2 240 aaPredicted RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 SLC26A7Q8TE54 656 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 PYROXD1Q8WU10 500 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 GRAMD1AQ96CP6 724 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 NMD3Q96D46 503 aaKnown RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 HIC2Q96JB3 615 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 CENPKQ9BS16 269 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 STK33Q9BYT3 514 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 PARVGQ9HBI0 331 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 ABCC6O95255 1503 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 B2RBV5 119 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 H0YGN5 161 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 UNC5CO95185 931 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 LMNAP02545 664 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 NSFP46459 744 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 FMO5P49326 533 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 NOP14P78316 857 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 SEMA3FQ13275 785 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 BLMHQ13867 455 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 BSPRYQ5W0U4 402 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 RGS9BPQ6ZS82 235 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 EMSYQ7Z589 1322 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 SLC13A5Q86YT5 568 aaPredicted RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 XRN1Q8IZH2 1706 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 TCHPQ9BT92 498 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 NKX1-2Q9UD57 310 aaPredicted RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 NFS1Q9Y697 457 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 H3BRJ5 948 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 SETSIPP0DME0 302 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 TNNI1P19237 187 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 MXI1P50539 228 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 GTF2IP78347 998 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 PDIA2Q13087 525 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 P3H1Q32P28 736 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 ANO3Q9BYT9 981 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 DCLRE1BQ9H816 532 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 PIDD1Q9HB75 910 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 FAF1Q9UNN5 650 aaPredicted RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 SRRM3A6NNA2 597 aaPredicted RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 DNAJC6O75061 913 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 BASP1P80723 227 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 DYNC1I2Q13409 638 aaKnown RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 LIN9Q5TKA1 542 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 DUPD1Q68J44 220 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 MAIP1Q8WWC4 291 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 RSAD2Q8WXG1 361 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 CENPTQ96BT3 561 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 SLC13A1Q9BZW2 595 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 ROPN1BQ9BZX4 212 aaPredicted RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 ROPN1Q9HAT0 212 aaPredicted RBP11.61□□□□□ -0.55
PALB2-206ENST00000568219 NDE1Q9NXR1 346 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 ARMCX1Q9P291 453 aa11.61□□□□□ -0.55
PALB2-206ENST00000568219 TCRBV7S2A1N4TA0A589 114 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 CCDC22O60826 627 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ADGRF4Q8IZF3 695 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 PRELID2Q8N945 189 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 RBM46Q8TBY0 533 aaKnown RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 SERPINB12Q96P63 405 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ZNF317Q96PQ6 595 aaPredicted RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 FNBP1Q96RU3 617 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 PAGR1Q9BTK6 254 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ANGPTL2Q9UKU9 493 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 PFASO15067 1338 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 AFF2P51816 1311 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 SORBS3O60504 671 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 MED24O75448 989 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 SMNDC1O75940 238 aaKnown RBP eCLIP11.6□□□□□ -0.55
PALB2-206ENST00000568219 KRT36O76013 467 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 INHBAP08476 426 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 KRT4P19013 534 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 SERPINB3P29508 390 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 TMPRSS15P98073 1019 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 COG2Q14746 738 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 KIF22Q14807 665 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ECM1Q16610 540 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ASTE1Q2TB18 679 aaPredicted RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 WDR44Q5JSH3 913 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ARHGAP22Q7Z5H3 698 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ATP8B4Q8TF62 1192 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 UCMAQ8WVF2 138 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 EBF2Q9HAK2 575 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 SLC5A4Q9NY91 659 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 CHMP2BQ9UQN3 213 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 PNMA6FA0A0J9YX94 578 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ATP6V1B1P15313 513 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 RFC4P35249 363 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms