RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 SNTG2Q9NY99 539 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 KANSL3Q9P2N6 904 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 GDAQ9Y2T3 454 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 PCDHB12Q9Y5F1 795 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 MRPL42Q9Y6G3 142 aaKnown RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 PTPRSQ13332 1948 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 PVALEFA0A1B0GWK0 134 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 FRMD3A2A2Y4 597 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 MEIS3P2A8K0S8 358 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 TULP1O00294 542 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-219ENST00000567399 KINO60870 393 aaKnown RBP16.6■□□□□ 0.25
COMMD4-219ENST00000567399 GADD45BO75293 160 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-219ENST00000567399 OFD1O75665 1012 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 ARHGEF15O94989 841 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 OSTNP61366 133 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 ERVK-21P61565 698 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 GRIN2CQ14957 1233 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 FAM26FQ5R3K3 315 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 CNNM4Q6P4Q7 775 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 AGMOQ6ZNB7 445 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 ZBTB45Q96K62 511 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-219ENST00000567399 GBP3Q9H0R5 595 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 ST6GALNAC4Q9H4F1 302 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 KLK14Q9P0G3 267 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 GIT1Q9Y2X7 761 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 GBF1Q92538 1859 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 MYH11P35749 1972 aa16.6■□□□□ 0.25
COMMD4-219ENST00000567399 TTC3P53804 2025 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 GOLGA6L22H0YM25 854 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 POMCP01189 267 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 MYBP10242 640 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 MCF2P10911 925 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 IGFBP4P22692 258 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 BMPR1AP36894 532 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 MLH1P40692 756 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 UBE2HP62256 183 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
COMMD4-219ENST00000567399 EPC2Q52LR7 807 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
COMMD4-219ENST00000567399 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 FMR1NBQ8N0W7 255 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-219ENST00000567399 HPS3Q969F9 1004 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 FIZ1Q96SL8 496 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 GAD1Q99259 594 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 CDT1Q9H211 546 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 TMEM206Q9H813 350 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 RC3H2Q9HBD1 1191 aaKnown RBP16.59■□□□□ 0.25
COMMD4-219ENST00000567399 RNF19AQ9NV58 838 aa16.59■□□□□ 0.25
COMMD4-219ENST00000567399 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 PRPF6O94906 941 aaKnown RBP16.58■□□□□ 0.24
COMMD4-219ENST00000567399 LAG3P18627 525 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 GPM6BQ13491 265 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 SLFN12LQ6IEE8 588 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 MAP4K3Q8IVH8 894 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 ACAP3Q96P50 834 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 SLC39A2Q9NP94 309 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 TOPORSQ9NS56 1045 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-219ENST00000567399 MTMR10Q9NXD2 777 aa16.58■□□□□ 0.24
COMMD4-219ENST00000567399 TRIOBPQ9H2D6 2365 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 RFXAPO00287 272 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 ZC3H11AO75152 810 aaKnown RBP eCLIP16.57■□□□□ 0.24
COMMD4-219ENST00000567399 NR1I2O75469 434 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 RECQL4O94761 1208 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 RPN1P04843 607 aaKnown RBP16.57■□□□□ 0.24
COMMD4-219ENST00000567399 RB1P06400 928 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 PRR29P0C7W0 189 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 GRM5P41594 1212 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 ALDH7A1P49419 539 aaKnown RBP16.57■□□□□ 0.24
COMMD4-219ENST00000567399 CASP5P51878 434 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 PSMD2Q13200 908 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 POSTNQ15063 836 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 KMT5BQ4FZB7 885 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 SPRED2Q7Z698 418 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 NOC3LQ8WTT2 800 aaKnown RBP16.57■□□□□ 0.24
COMMD4-219ENST00000567399 MYLIPQ8WY64 445 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 POMGNT1Q8WZA1 660 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 KCNN1Q92952 543 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 CLP1Q92989 425 aaKnown RBP16.57■□□□□ 0.24
COMMD4-219ENST00000567399 TIGD1Q96MW7 591 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 ZNF558Q96NG5 402 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-219ENST00000567399 C11orf84Q9BUA3 381 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-219ENST00000567399 MSTO1Q9BUK6 570 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 PLVAPQ9BX97 442 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 PTPRHQ9HD43 1115 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 TBC1D13Q9NVG8 400 aa16.57■□□□□ 0.24
COMMD4-219ENST00000567399 SMC2O95347 1197 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 PIGRP01833 764 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 FOSL2P15408 326 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 PROZP22891 400 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 SCNN1GP51170 649 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 MCL1Q07820 350 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
COMMD4-219ENST00000567399 KYAT1Q16773 422 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 LRRC55Q6ZSA7 311 aa16.56■□□□□ 0.24
COMMD4-219ENST00000567399 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms