RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 TIPINQ9BVW5 301 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 COL4A1P02462 1669 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 KAT6BQ8WYB5 2073 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 MARCKSL1P49006 195 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 POLE2P56282 527 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 SIX1Q15475 284 aaPredicted RBP26.77■■□□□ 1.88
FANCA-221ENST00000566889 SYDE1Q6ZW31 735 aaPredicted RBP26.77■■□□□ 1.88
FANCA-221ENST00000566889 SRRM1Q8IYB3 904 aaKnown RBP26.77■■□□□ 1.88
FANCA-221ENST00000566889 NEDD1Q8NHV4 660 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 BORCS6Q96GS4 357 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 SAR1AQ9NR31 198 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 TAS2R14Q9NYV8 317 aa26.77■■□□□ 1.88
FANCA-221ENST00000566889 MAGEA13PA6NCF6 341 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 TP73O15350 636 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 THAP12O43422 761 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 ENTPD5O75356 428 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 KIF22Q14807 665 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 CCDC6Q16204 474 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 COA7Q96BR5 231 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 NAALADL1Q9UQQ1 740 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 ASTN1O14525 1302 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 SPATA31A1Q5TZJ5 1347 aa26.76■■□□□ 1.87
FANCA-221ENST00000566889 PYGMP11217 842 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 HIBADHP31937 336 aaKnown RBP26.75■■□□□ 1.87
FANCA-221ENST00000566889 CASP4P49662 377 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 SFR1Q86XK3 245 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 CYP4X1Q8N118 509 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 SLC44A5Q8NCS7 719 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 FAM81AQ8TBF8 368 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 SNF8Q96H20 258 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 RBM41Q96IZ5 413 aaKnown RBP26.75■■□□□ 1.87
FANCA-221ENST00000566889 GPR88Q9GZN0 384 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 UBN1Q9NPG3 1134 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 SEPT11Q9NVA2 429 aaKnown RBP26.75■■□□□ 1.87
FANCA-221ENST00000566889 PDP2Q9P2J9 529 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 SLC18A1P54219 525 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 NR1H3Q13133 447 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 STAT4Q14765 748 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 ZC3H12AQ5D1E8 599 aaKnown RBP26.75■■□□□ 1.87
FANCA-221ENST00000566889 EYA3Q99504 573 aa26.75■■□□□ 1.87
FANCA-221ENST00000566889 MTA2O94776 668 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 ASMTLO95671 621 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 MYBL1P10243 752 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 COMTP21964 271 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 CLK2P49760 499 aaKnown RBP26.74■■□□□ 1.87
FANCA-221ENST00000566889 GPC5P78333 572 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 RCN2Q14257 317 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 KYNUQ16719 465 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 C4orf50Q6ZRC1 276 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 RNF207Q6ZRF8 634 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 ARHGAP18Q8N392 663 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 UCMAQ8WVF2 138 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 CD101Q93033 1021 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 AGPAT1Q99943 283 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 UBA5Q9GZZ9 404 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 DMAP1Q9NPF5 467 aaPredicted RBP26.74■■□□□ 1.87
FANCA-221ENST00000566889 RFX1P22670 979 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 CHKAP35790 457 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 KCNJ1P48048 391 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 WDR4P57081 412 aaKnown RBP26.74■■□□□ 1.87
FANCA-221ENST00000566889 KRT17Q04695 432 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 LRRC23Q53EV4 343 aaPredicted RBP26.74■■□□□ 1.87
FANCA-221ENST00000566889 SLC45A4Q5BKX6 768 aa26.74■■□□□ 1.87
FANCA-221ENST00000566889 MAN1A1P33908 653 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 PSMC2P35998 433 aaKnown RBP26.73■■□□□ 1.87
FANCA-221ENST00000566889 SNX30Q5VWJ9 437 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 ZNF449Q6P9G9 518 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 SH3RF3Q8TEJ3 882 aaPredicted RBP26.73■■□□□ 1.87
FANCA-221ENST00000566889 MAIP1Q8WWC4 291 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 DNAJC18Q9H819 358 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 NIP7Q9Y221 180 aaKnown RBP eCLIP26.73■■□□□ 1.87
FANCA-221ENST00000566889 PCDHB13Q9Y5F0 798 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 TCRBV7S2A1N4TA0A589 114 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 FOXO6A8MYZ6 492 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 MUTP22033 750 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 FMO5P49326 533 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 SPARCL1Q14515 664 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 NINJ2Q9NZG7 142 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 ASIC3Q9UHC3 531 aa26.73■■□□□ 1.87
FANCA-221ENST00000566889 EDF1O60869 148 aaKnown RBP26.72■■□□□ 1.87
FANCA-221ENST00000566889 ATP9AO75110 1047 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 CACNA2D1P54289 1103 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 NFIL3Q16649 462 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 GSTA3Q16772 222 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 FAM186BQ8IYM0 893 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 SYT2Q8N9I0 419 aaPredicted RBP26.72■■□□□ 1.87
FANCA-221ENST00000566889 C10orf82Q8WW14 230 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 MKNK1Q9BUB5 465 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 PCMTD2Q9NV79 361 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 EURLQ9NYK6 297 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 APEX2Q9UBZ4 518 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 SNED1Q8TER0 1413 aa26.72■■□□□ 1.87
FANCA-221ENST00000566889 TMEM110-MUSTN1A8MSY1 372 aa26.71■■□□□ 1.87
FANCA-221ENST00000566889 RASA4BC9J798 803 aa26.71■■□□□ 1.87
FANCA-221ENST00000566889 RASA4O43374 803 aa26.71■■□□□ 1.87
FANCA-221ENST00000566889 KCNA3P22001 575 aa26.71■■□□□ 1.87
FANCA-221ENST00000566889 PSMC4P43686 418 aa26.71■■□□□ 1.87
FANCA-221ENST00000566889 DNAJC3Q13217 504 aa26.71■■□□□ 1.87
FANCA-221ENST00000566889 SF3B3Q15393 1217 aaKnown RBP26.71■■□□□ 1.87
FANCA-221ENST00000566889 GJA10Q969M2 543 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms