RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 TOPORSQ9NS56 1045 aaPredicted RBP19.25■□□□□ 0.67
HERC2-208ENST00000566635 PRMT7Q9NVM4 692 aaPredicted RBP19.25■□□□□ 0.67
HERC2-208ENST00000566635 LRRIQ3A6PVS8 624 aaPredicted RBP19.24■□□□□ 0.67
HERC2-208ENST00000566635 CLDN3O15551 220 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
HERC2-208ENST00000566635 GCLMP48507 274 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 WNT7BP56706 349 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 TMEM132AQ24JP5 1023 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 ATF7IP2Q5U623 682 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 EEF1DP3Q658K8 133 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 DPY19L2P1Q6NXN4 242 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 TSHZ1Q6ZSZ6 1077 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 ZNF410Q86VK4 478 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 CCDC51Q96ER9 411 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 FAM84AQ96KN4 292 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 POP1Q99575 1024 aaKnown RBP19.24■□□□□ 0.67
HERC2-208ENST00000566635 A0A1W2PQJ5 194 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 GPR32O75388 356 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 FGFR4P22455 802 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 PROZP22891 400 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 PON1P27169 355 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 PRMT2P55345 433 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 GBP6Q6ZN66 633 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 PARD3BQ8TEW8 1205 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 SH3TC2Q8TF17 1288 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 TCHPQ9BT92 498 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 GANQ9H2C0 597 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 CDHR5Q9HBB8 845 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 RRAGDQ9NQL2 400 aaPredicted RBP19.24■□□□□ 0.67
HERC2-208ENST00000566635 GTF2IRD1Q9UHL9 959 aa19.24■□□□□ 0.67
HERC2-208ENST00000566635 CNTNAP2Q9UHC6 1331 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 ZNF233A6NK53 670 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 KIAA0391O15091 583 aaKnown RBP19.23■□□□□ 0.67
HERC2-208ENST00000566635 FAM189A1O60320 539 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 FAM187BQ17R55 369 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 FAM47CQ5HY64 1035 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 GDF6Q6KF10 455 aaPredicted RBP19.23■□□□□ 0.67
HERC2-208ENST00000566635 GPIHBP1Q8IV16 184 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 CPB2Q96IY4 423 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 DNAJC7Q99615 494 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 OSMRQ99650 979 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 PTPRHQ9HD43 1115 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 SIX2Q9NPC8 291 aa19.23■□□□□ 0.67
HERC2-208ENST00000566635 GTPBP10A4D1E9 387 aaKnown RBP19.22■□□□□ 0.67
HERC2-208ENST00000566635 NRDCO43847 1150 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 DLATP10515 647 aaKnown RBP19.22■□□□□ 0.67
HERC2-208ENST00000566635 TNFSF9P41273 254 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 ZBED6P86452 979 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 MCL1Q07820 350 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 NOLC1Q14978 699 aaKnown RBP eCLIP19.22■□□□□ 0.67
HERC2-208ENST00000566635 ZNF568Q3ZCX4 644 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 MPZL3Q6UWV2 235 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 BAP1Q92560 729 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 KIAA1586Q9HCI6 787 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 HMX1Q9NP08 348 aaPredicted RBP19.22■□□□□ 0.67
HERC2-208ENST00000566635 NLRC4Q9NPP4 1024 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 SOWAHDA6NJG2 315 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 GNAT1P11488 350 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 MCCD1P59942 119 aaPredicted RBP19.22■□□□□ 0.67
HERC2-208ENST00000566635 POLR2FP61218 127 aaKnown RBP19.22■□□□□ 0.67
HERC2-208ENST00000566635 E4F1Q66K89 784 aaPredicted RBP19.22■□□□□ 0.67
HERC2-208ENST00000566635 OR8K1Q8NGG5 319 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 TMC2Q8TDI7 906 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 TMEM117Q9H0C3 514 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 RBAKQ9NYW8 714 aaPredicted RBP19.22■□□□□ 0.67
HERC2-208ENST00000566635 CEP72Q9P209 647 aa19.22■□□□□ 0.67
HERC2-208ENST00000566635 GRIN2DO15399 1336 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 LRRC53A6NM62 1247 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 STX10O60499 249 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 TSPAN1O60635 241 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 ARF4P18085 180 aaPredicted RBP19.21■□□□□ 0.67
HERC2-208ENST00000566635 FECHP22830 423 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 MXI1P50539 228 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 MTF1Q14872 753 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 LMBRD2Q68DH5 695 aaPredicted RBP19.21■□□□□ 0.67
HERC2-208ENST00000566635 TRIM65Q6PJ69 517 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 SRGAP1Q7Z6B7 1085 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 RNF180Q86T96 592 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 CEP120Q8N960 986 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 IQCDQ96DY2 449 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 CDT1Q9H211 546 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 PDZD7Q9H5P4 517 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 AJAP1Q9UKB5 411 aaPredicted RBP19.21■□□□□ 0.67
HERC2-208ENST00000566635 TNFSF13BQ9Y275 285 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 FHOD1Q9Y613 1164 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 LRRN2O75325 713 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 LDHAP00338 332 aaKnown RBP19.21■□□□□ 0.67
HERC2-208ENST00000566635 PSMD6Q15008 389 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 KLHDC7AQ5VTJ3 777 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 LHX8Q68G74 356 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 GJB7Q6PEY0 223 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 WDR59Q6PJI9 974 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 CACNA2D4Q7Z3S7 1137 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 PCSK9Q8NBP7 692 aaKnown RBP19.21■□□□□ 0.67
HERC2-208ENST00000566635 PRIMPOLQ96LW4 560 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 INTS2Q9H0H0 1204 aaKnown RBP19.21■□□□□ 0.67
HERC2-208ENST00000566635 PDE11AQ9HCR9 933 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 PLCB1Q9NQ66 1216 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 WBP1LQ9NX94 342 aa19.21■□□□□ 0.67
HERC2-208ENST00000566635 PTPRJQ12913 1337 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms