RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 ITGA4P13612 1032 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 ATF7P17544 494 aaPredicted RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 ABCD1P33897 745 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 LIG4P49917 911 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 BTG3Q14201 252 aaPredicted RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 FAM26FQ5R3K3 315 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 KANK3Q6NY19 840 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 APBB1IPQ7Z5R6 666 aaPredicted RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 ZBTB33Q86T24 672 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 HELQQ8TDG4 1101 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 CCDC47Q96A33 483 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 FIZ1Q96SL8 496 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 TCHPQ9BT92 498 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 NXF3Q9H4D5 531 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 OLFML3Q9NRN5 406 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 TBX20Q9UMR3 447 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 INPP5FQ9Y2H2 1132 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 HES2Q9Y543 173 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 IPPQ9Y573 584 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 TCF20Q9UGU0 1960 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 A0A1B0GUA9 196 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 GOLGA6L22H0YM25 854 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 DGKIO75912 1065 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 SCP2P22307 547 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 CASP5P51878 434 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 FAM189BP81408 668 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 HTRA4P83105 476 aaPredicted RBP17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 DCAF4L1Q3SXM0 396 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 CNNM4Q6P4Q7 775 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 STXBP4Q6ZWJ1 553 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 FIBCD1Q8N539 461 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 ENGASEQ8NFI3 743 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 ACO2Q99798 780 aaKnown RBP17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 TRAIPQ9BWF2 469 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 FGFBP2Q9BYJ0 223 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 TNFSF13BQ9Y275 285 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 COL4A6Q14031 1691 aa17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 FNDC1Q4ZHG4 1894 aaPredicted RBP17.92■□□□□ 0.46
SCAMP2-208ENST00000566557 MEIS3P2A8K0S8 358 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 EOMESO95936 686 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 RPN1P04843 607 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 MYL1P05976 194 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 GTF2BQ00403 316 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 SNW1Q13573 536 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 ALCAMQ13740 583 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 POSTNQ15063 836 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 SPOUT1Q5T280 376 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 GLB1LQ6UWU2 654 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 MPZL3Q6UWV2 235 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 ZNF720Q7Z2F6 126 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 ZNF598Q86UK7 904 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 MAP4K3Q8IVH8 894 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 SYCP3Q8IZU3 236 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 SMG8Q8ND04 991 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 HVCN1Q96D96 273 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 CDT1Q9H211 546 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 ST6GALNAC4Q9H4F1 302 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 RSAD1Q9HA92 442 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 PARP2Q9UGN5 583 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 HOOK1Q9UJC3 728 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 MTUS1Q9ULD2 1270 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 PCDHB13Q9Y5F0 798 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 KIAA1671Q9BY89 1806 aa17.91■□□□□ 0.46
SCAMP2-208ENST00000566557 NLRC5Q86WI3 1866 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 PVALEFA0A1B0GWK0 134 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 ZNF623O75123 536 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 ARHGEF15O94989 841 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 PNOCQ13519 176 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 KMT5BQ4FZB7 885 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 CLLU1OSQ5K130 101 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 L1TD1Q5T7N2 865 aaKnown RBP17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 ZPBP2Q6X784 338 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 CLEC17AQ6ZS10 378 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 CMTR2Q8IYT2 770 aaKnown RBP17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 ZNF689Q96CS4 500 aaPredicted RBP17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 ZBTB45Q96K62 511 aaPredicted RBP17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 ACCSQ96QU6 501 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 CERS4Q9HA82 394 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 SLC39A2Q9NP94 309 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 RNF19AQ9NV58 838 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 EXOC7Q9UPT5 735 aa17.9■□□□□ 0.46
SCAMP2-208ENST00000566557 LINC01553A4QN01 128 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 KLRC4O43908 158 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 TOM1L1O75674 476 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 PRPF6O94906 941 aaKnown RBP17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 AKAP5P24588 427 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 MLH1P40692 756 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 OSTNP61366 133 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 DPYDQ12882 1025 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 NOLC1Q14978 699 aaKnown RBP eCLIP17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 AGMOQ6ZNB7 445 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 ALYREFQ86V81 257 aaKnown RBP17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 THNSL1Q8IYQ7 743 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 CRIPAKQ8N1N5 446 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 GLIS3Q8NEA6 775 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 URGCPQ8TCY9 931 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 SP7Q8TDD2 431 aaPredicted RBP17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
SCAMP2-208ENST00000566557 RC3H2Q9HBD1 1191 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms