RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FAM187BQ17R55 369 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 HAUS3Q68CZ6 603 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 KIAA1841Q6NSI8 718 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 BMP8AQ7Z5Y6 402 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 PPFIBP1Q86W92 1011 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 ZBTB8OSQ8IWT0 167 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 HACE1Q8IYU2 909 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 PRIMPOLQ96LW4 560 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 RIPOR3Q96MK2 946 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 EMILIN2Q9BXX0 1053 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 POLD4Q9HCU8 107 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 MRPL17Q9NRX2 175 aaKnown RBP20.27■□□□□ 0.84
USB1-213ENST00000566292 KLK14Q9P0G3 267 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 NR2E1Q9Y466 385 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 PCDHB6Q9Y5E3 794 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 WDFY4Q6ZS81 3184 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 ZMYM2Q9UBW7 1377 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 ZDBF2Q9HCK1 2354 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 C2CD2LO14523 706 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 EDN1P05305 212 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 KLRC2P26717 231 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 CABP7Q86V35 215 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 MFSD14AQ96MC6 490 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 FBXL18Q96ME1 805 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 CCDC113Q9H0I3 377 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 PDZD7Q9H5P4 517 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 LRWD1Q9UFC0 647 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 PARP2Q9UGN5 583 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 USP20Q9Y2K6 914 aa20.26■□□□□ 0.83
USB1-213ENST00000566292 URODP06132 367 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 NAMPTP43490 491 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 SIGLEC14Q08ET2 396 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 PTGDRQ13258 359 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 RABEP1Q15276 862 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 TMC5Q6UXY8 1006 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 IGSF22Q8N9C0 903 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 RPS6KC1Q96S38 1066 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 C2orf40Q9H1Z8 148 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 BHMT2Q9H2M3 363 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 KIAA1024Q9UPX6 916 aa20.25■□□□□ 0.83
USB1-213ENST00000566292 PRKCBP05771 671 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
USB1-213ENST00000566292 GLUD2P49448 558 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 GRIK3Q13003 919 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 PDIA5Q14554 519 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 ATAT1Q5SQI0 421 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 KIAA0319Q5VV43 1072 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 RABGGTAQ92696 567 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 PBXIP1Q96AQ6 731 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 ASIC4Q96FT7 647 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 KIFC3Q9BVG8 833 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 COLEC11Q9BWP8 271 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 SFXN1Q9H9B4 322 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 CACNG4Q9UBN1 327 aa20.24■□□□□ 0.83
USB1-213ENST00000566292 PP2D1A8MPX8 630 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 ACKR2O00590 384 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 N4BP3O15049 544 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 TEX28O15482 410 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 NR1I2O75469 434 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 DSG1Q02413 1049 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 PRPF4BQ13523 1007 aaKnown RBP20.23■□□□□ 0.83
USB1-213ENST00000566292 IL17AQ16552 155 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 MAPK6Q16659 721 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 EEF1DP3Q658K8 133 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 FUT10Q6P4F1 479 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 GPR149Q86SP6 731 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 DEPTORQ8TB45 409 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 SNX29Q8TEQ0 813 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 GPR62Q9BZJ7 368 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 CXCL16Q9H2A7 254 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 RXFP1Q9HBX9 757 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 CHST7Q9NS84 486 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 DDX19AQ9NUU7 478 aaKnown RBP20.23■□□□□ 0.83
USB1-213ENST00000566292 SSX2IPQ9Y2D8 614 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 MYH11P35749 1972 aa20.23■□□□□ 0.83
USB1-213ENST00000566292 CD2BP2O95400 341 aaKnown RBP20.22■□□□□ 0.83
USB1-213ENST00000566292 LIG1P18858 919 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 PPP2R5AQ15172 486 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 KREMEN2Q8NCW0 462 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 B3GALT6Q96L58 329 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 PAAF1Q9BRP4 392 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 MAN1C1Q9NR34 630 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.22■□□□□ 0.83
USB1-213ENST00000566292 SNTG2Q9NY99 539 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 ADAM28Q9UKQ2 775 aa20.22■□□□□ 0.83
USB1-213ENST00000566292 VWA8A3KMH1 1905 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 SPDYE4A6NLX3 237 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 E9PMD0 336 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 PTGESO14684 152 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 RECQL4O94761 1208 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 ADH1AP07327 375 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 CDC25AP30304 524 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 TMEM132AQ24JP5 1023 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 ZBTB33Q86T24 672 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 ZDHHC14Q8IZN3 488 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 TDRD5Q8NAT2 981 aaKnown RBP20.21■□□□□ 0.83
USB1-213ENST00000566292 KIFAP3Q92845 792 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms