RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 HCFC1R1Q9NWW0 138 aa18.73■□□□□ 0.59
CLK3-217ENST00000566126 FREM2Q5SZK8 3169 aa18.73■□□□□ 0.59
CLK3-217ENST00000566126 DDAH1O94760 285 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 CHRNB1P11230 501 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 HOXC13P31276 330 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 ZNF252P-AS1Q0IIN9 211 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 USP41Q3LFD5 358 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 TANGO2Q6ICL3 276 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 TYW1BQ6NUM6 668 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 CEP68Q76N32 757 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 CATSPER4Q7RTX7 472 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 FAM3CQ92520 227 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 SCNM1Q9BWG6 230 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 SMOC1Q9H4F8 434 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 DIAPH3Q9NSV4 1193 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 POLIQ9UNA4 740 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
CLK3-217ENST00000566126 EPN2O95208 641 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 PAPSS2O95340 614 aaPredicted RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 FOSP01100 380 aaPredicted RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 C8AP07357 584 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 HOXA9P31269 272 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 ZNF76P36508 570 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 PRKCEQ02156 737 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 TARBP2Q15633 366 aaKnown RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 PLA2G2CQ5R387 149 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 PPM1LQ5SGD2 360 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 UBXN11Q5T124 520 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 FUT10Q6P4F1 479 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 PRSS55Q6UWB4 352 aaPredicted RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 HEATR3Q7Z4Q2 680 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 SPEM1Q8N4L4 309 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 MCRS1Q96EZ8 462 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 INO80BQ9C086 356 aaPredicted RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 NRBP2Q9NSY0 501 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 MIOSQ9NXC5 875 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 DNMT3BQ9UBC3 853 aaKnown RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
CLK3-217ENST00000566126 KCNH3Q9ULD8 1083 aa18.71■□□□□ 0.59
CLK3-217ENST00000566126 BPTFQ12830 3046 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 CYP21A2P08686 494 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 GNAQP50148 359 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 CDC42EP1Q00587 391 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 LIN9Q5TKA1 542 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 ZNF410Q86VK4 478 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 ELSPBP1Q96BH3 223 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 CEP89Q96ST8 783 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 ZNF577Q9BSK1 485 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 RIC8AQ9NPQ8 531 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 TBC1D22BQ9NU19 505 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 C2orf42Q9NWW7 574 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 RCAN3Q9UKA8 241 aa18.7■□□□□ 0.58
CLK3-217ENST00000566126 IGKV6-21A0A0C4DH24 114 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 XYLBO75191 536 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 FCARP24071 287 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 RAP1GAPP47736 663 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 RBM25P49756 843 aaKnown RBP18.69■□□□□ 0.58
CLK3-217ENST00000566126 CREMQ03060 361 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 GRM2Q14416 872 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 UGCGQ16739 394 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 PABPC1LQ4VXU2 614 aaKnown RBP18.69■□□□□ 0.58
CLK3-217ENST00000566126 RNF43Q68DV7 783 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 WWC2Q6AWC2 1192 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 KSR1Q8IVT5 923 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 LOXL4Q96JB6 756 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 CLSTN3Q9BQT9 956 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 BRD9Q9H8M2 597 aa18.69■□□□□ 0.58
CLK3-217ENST00000566126 PDCD11Q14690 1871 aaKnown RBP18.69■□□□□ 0.58
CLK3-217ENST00000566126 NRG2O14511 850 aaPredicted RBP18.68■□□□□ 0.58
CLK3-217ENST00000566126 POU2F2P09086 479 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 RXRAP19793 462 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 PTGDRQ13258 359 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 SLC5A9Q2M3M2 681 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 RTP2Q5QGT7 225 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 RHPN2Q8IUC4 686 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 CCDC82Q8N4S0 544 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 SMG8Q8ND04 991 aaKnown RBP18.68■□□□□ 0.58
CLK3-217ENST00000566126 CRYGNQ8WXF5 182 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 GAD1Q99259 594 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 COLEC11Q9BWP8 271 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 GDE1Q9NZC3 331 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 SAMM50Q9Y512 469 aa18.68■□□□□ 0.58
CLK3-217ENST00000566126 ARL5CA6NH57 179 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 HOXA11P31270 313 aaPredicted RBP18.67■□□□□ 0.58
CLK3-217ENST00000566126 MLH1P40692 756 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 CLK2P49760 499 aaKnown RBP18.67■□□□□ 0.58
CLK3-217ENST00000566126 SCNN1GP51170 649 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 RALYLQ86SE5 291 aaKnown RBP18.67■□□□□ 0.58
CLK3-217ENST00000566126 WDR5BQ86VZ2 330 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 NCOA7Q8NI08 942 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 SLC7A14Q8TBB6 771 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 RNF39Q9H2S5 420 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 IFT122Q9HBG6 1241 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 RBM12Q9NTZ6 932 aaKnown RBP18.67■□□□□ 0.58
CLK3-217ENST00000566126 ADAM28Q9UKQ2 775 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 MRPS23Q9Y3D9 190 aaKnown RBP18.67■□□□□ 0.58
CLK3-217ENST00000566126 PIAS3Q9Y6X2 628 aa18.67■□□□□ 0.58
CLK3-217ENST00000566126 E7EWF7 191 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms