RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MTTPP55157 894 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 RPS6P62753 249 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 FUT2Q10981 343 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 DNAJC3Q13217 504 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ST13P5Q8NFI4 369 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 GTF3C2Q8WUA4 911 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 GAB3Q8WWW8 586 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 P2RX5Q93086 422 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 VPS54Q9P1Q0 977 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 EFR3BQ9Y2G0 817 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PCDHA3Q9Y5H8 950 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 WASF2Q9Y6W5 498 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 TXNDC9O14530 226 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 MSLNQ13421 630 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 SPIDRQ14159 915 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 NPY5RQ15761 445 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CWF19L2Q2TBE0 894 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.1□□□□□ -1.91
CHD9-218ENST00000566029 ZMAT1Q5H9K5 638 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 IQCF2Q8IXL9 164 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 USP29Q9HBJ7 922 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CHKBQ9Y259 395 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 NWD2Q9ULI1 1742 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ASMTLO95671 621 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SERPINB3P29508 390 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CASP7P55210 303 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ALX1Q15699 326 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ZNF467Q7Z7K2 595 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 VPS36Q86VN1 386 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 REM2Q8IYK8 340 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 TRIM22Q8IYM9 498 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.1□□□□□ -1.918e-7■■■■■ 29.2
CHD9-218ENST00000566029 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.1□□□□□ -1.91
CHD9-218ENST00000566029 CCDC42Q96M95 316 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 MIPEPQ99797 713 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 BLZF1Q9H2G9 400 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PLGRKTQ9HBL7 147 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PARP2Q9UGN5 583 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 KCNJ14Q9UNX9 436 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SPEF1Q9Y4P9 236 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 TRIM17Q9Y577 477 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PALMO75781 387 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 HARSP12081 509 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 RPL5P46777 297 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 NPEPPSP55786 919 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 POLR2FP61218 127 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 ST13P4Q8IZP2 240 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 ANKK1Q8NFD2 765 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 OSBP2Q969R2 916 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PAIP2BQ9ULR5 123 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 SLC5A2P31639 672 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 EARS2Q5JPH6 523 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 ATG9AQ7Z3C6 839 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 FNDC8Q8TC99 324 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 STAMQ92783 540 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 DHRS1Q96LJ7 313 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 RXFP1Q9HBX9 757 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 GPAMQ9HCL2 828 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ARHGEF4Q9NR80 690 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 STX18Q9P2W9 335 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 DBF4Q9UBU7 674 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 KIAA0391O15091 583 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 DDX3YO15523 660 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 GMNNO75496 209 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 RHOBTB1O94844 696 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 MYCLP12524 364 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 KRT13P13646 458 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 EHHADHQ08426 723 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PWP1Q13610 501 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 TAF12Q16514 161 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SLC2A7Q6PXP3 512 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 GATAD2AQ86YP4 633 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PM20D2Q8IYS1 436 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 LZTR1Q8N653 840 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 NCOA7Q8NI08 942 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 DGCR14Q96DF8 476 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 PHF20Q9BVI0 1012 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CNGB3Q9NQW8 809 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PPP1R9AQ9ULJ8 1098 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CEP170BQ9Y4F5 1589 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 AXIN1O15169 862 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PTPN4P29074 926 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 IL1RL1Q01638 556 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 RNASELQ05823 741 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 C6orf118Q5T5N4 469 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 RAPH1Q70E73 1250 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SFR1Q86XK3 245 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ALDH16A1Q8IZ83 802 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CYP4X1Q8N118 509 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 TTC30BQ8N4P2 665 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 DENND1AQ8TEH3 1009 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CLMNQ96JQ2 1002 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CNOT6LQ96LI5 555 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 CCDC77Q9BR77 488 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 MOSPD1Q9UJG1 213 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 FER1L4A9Z1Z3 1794 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CCDC194A0A1B0GVG4 234 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SCG2P13521 617 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SMARCA1P28370 1054 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ADCY1Q08828 1119 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms