RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 KCNMB3Q9NPA1 279 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 VAV3Q9UKW4 847 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 CITO14578 2027 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 COL4A3Q01955 1670 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 DCNP07585 359 aaKnown RBP14.24□□□□□ -0.13
RNF40-208ENST00000565995 OR1G1P47890 313 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 PTENP60484 403 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 USP41Q3LFD5 358 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 BLIDQ8IZY5 108 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 RIN2Q8WYP3 895 aaPredicted RBP14.24□□□□□ -0.13
RNF40-208ENST00000565995 TMEM143Q96AN5 459 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 SHDQ96IW2 340 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 CEP170P1Q96L14 293 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 GAD1Q99259 594 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 OSBPL6Q9BZF3 934 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 GPR62Q9BZJ7 368 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 WRAP73Q9P2S5 460 aaPredicted RBP14.24□□□□□ -0.13
RNF40-208ENST00000565995 FBXO4Q9UKT5 387 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 GIT1Q9Y2X7 761 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
RNF40-208ENST00000565995 GPR179Q6PRD1 2367 aa14.24□□□□□ -0.13
RNF40-208ENST00000565995 ACACBO00763 2458 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 F8W810 466 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 TSPAN1O60635 241 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 NR1I2O75469 434 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 ZMYND10O75800 440 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 SPATA31D3P0C874 917 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 HSPA4P34932 840 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 CREMQ03060 361 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 MXD4Q14582 209 aaPredicted RBP14.23□□□□□ -0.13
RNF40-208ENST00000565995 PPP4R3AQ6IN85 833 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 NOTUMQ6P988 496 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 SPATA31D4Q6ZUB0 917 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 PALB2Q86YC2 1186 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 EIF2AQ9BY44 585 aaKnown RBP14.23□□□□□ -0.13
RNF40-208ENST00000565995 PIDD1Q9HB75 910 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 DDX25Q9UHL0 483 aaKnown RBP14.23□□□□□ -0.13
RNF40-208ENST00000565995 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 NUMBLQ9Y6R0 609 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 COL4A2P08572 1712 aa14.23□□□□□ -0.13
RNF40-208ENST00000565995 SPTBN2O15020 2390 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 TICRRQ7Z2Z1 1910 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 POTEMA6NI47 508 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 TBX3O15119 743 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 SLC37A4O43826 429 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 RFX1P22670 979 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 MLH1P40692 756 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 SCNN1GP51170 649 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 EPHA7Q15375 998 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 AMHR2Q16671 573 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 SPECC1Q5M775 1068 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 FUT10Q6P4F1 479 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 RSPO2Q6UXX9 243 aaPredicted RBP14.22□□□□□ -0.13
RNF40-208ENST00000565995 OTUD6AQ7L8S5 288 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 RNF149Q8NC42 400 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 NELL1Q92832 810 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 FGF14Q92915 247 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 ZFP42Q96MM3 310 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
RNF40-208ENST00000565995 NFKBIZQ9BYH8 718 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 ADAM28Q9UKQ2 775 aa14.22□□□□□ -0.13
RNF40-208ENST00000565995 F5P12259 2224 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 KANSL1LA0AUZ9 987 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 ERLIN2O94905 339 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 DEXIO95424 95 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 POU2F2P09086 479 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 HNRNPA1P09651 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
RNF40-208ENST00000565995 HOXA9P31269 272 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 YWHABP31946 246 aaKnown RBP14.21□□□□□ -0.13
RNF40-208ENST00000565995 MAGEA9P43362 315 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 GPC5P78333 572 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 PRKCQQ04759 706 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 SSRP1Q08945 709 aaKnown RBP14.21□□□□□ -0.13
RNF40-208ENST00000565995 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
RNF40-208ENST00000565995 EMC2Q15006 297 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 GET4Q7L5D6 327 aaPredicted RBP14.21□□□□□ -0.13
RNF40-208ENST00000565995 TRIM22Q8IYM9 498 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 DCLK2Q8N568 766 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 GPR161Q8N6U8 529 aaKnown RBP14.21□□□□□ -0.13
RNF40-208ENST00000565995 HAS1Q92839 578 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 RPP25Q9BUL9 199 aaKnown RBP14.21□□□□□ -0.13
RNF40-208ENST00000565995 FOXQ1Q9C009 403 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 NCOA5Q9HCD5 579 aaKnown RBP14.21□□□□□ -0.13
RNF40-208ENST00000565995 XPNPEP1Q9NQW7 623 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 FBXW11Q9UKB1 542 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 CDH7Q9ULB5 785 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 HES2Q9Y543 173 aa14.21□□□□□ -0.13
RNF40-208ENST00000565995 A0A1B0GUA9 196 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 SPTLC1O15269 473 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 KINO60870 393 aaKnown RBP14.2□□□□□ -0.14
RNF40-208ENST00000565995 CDC45O75419 566 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 GCFC2P16383 781 aaKnown RBP14.2□□□□□ -0.14
RNF40-208ENST00000565995 ARF4P18085 180 aaPredicted RBP14.2□□□□□ -0.14
RNF40-208ENST00000565995 SDHBP21912 280 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 FSHRP23945 695 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 CCT2P78371 535 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms