RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ANKRD40Q6AI12 368 aa14.42□□□□□ -0.1
CX3CL1-204ENST00000565912 PID1Q7Z2X4 250 aa14.42□□□□□ -0.1
CX3CL1-204ENST00000565912 CALR3Q96L12 384 aaKnown RBP14.42□□□□□ -0.1
CX3CL1-204ENST00000565912 DDX56Q9NY93 547 aaKnown RBP14.42□□□□□ -0.1
CX3CL1-204ENST00000565912 STX18Q9P2W9 335 aaKnown RBP14.42□□□□□ -0.1
CX3CL1-204ENST00000565912 NARFQ9UHQ1 456 aa14.42□□□□□ -0.1
CX3CL1-204ENST00000565912 CDH6P55285 790 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 AGR3Q8TD06 166 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 CELF1Q92879 486 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 TJP2Q9UDY2 1190 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 PCDHGB4Q9UN71 923 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 ASAP2O43150 1006 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 TRIM49P0CI25 452 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 TRIM49CP0CI26 452 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 TYK2P29597 1187 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 CHRNA3P32297 505 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 GRM4Q14833 912 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 NFRKBQ6P4R8 1299 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 OTULINQ96BN8 352 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 DDX47Q9H0S4 455 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 NOP53Q9NZM5 478 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 AGO2Q9UKV8 859 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 ARFIP2P53365 341 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 TOB2Q14106 344 aaPredicted RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 RHOT1Q8IXI2 618 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 OR9Q1Q8NGQ5 310 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 CYP4F11Q9HBI6 524 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 ASMTLO95671 621 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 GRIK1P39086 918 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 FBXO38Q6PIJ6 1188 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 PATL1Q86TB9 770 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 SYNDIG1Q9H7V2 258 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 PP2D1A8MPX8 630 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 PIK3R2O00459 728 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 MYBL1P10243 752 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 LMBRD2Q68DH5 695 aaPredicted RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 DDX53Q86TM3 631 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 C1orf54Q8WWF1 131 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 EIF2AK1Q9BQI3 630 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 RUBCNLQ9H714 662 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 TRPC7Q9HCX4 862 aa14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 MAP3K20Q9NYL2 800 aaKnown RBP14.41□□□□□ -0.1
CX3CL1-204ENST00000565912 ESYT3A0FGR9 886 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 BRAFP15056 766 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 EPHA10Q5JZY3 1008 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 TTC39CQ8N584 583 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 UNC13BO14795 1591 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 CDK17Q00537 523 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 ZNF560Q96MR9 790 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 SEL1LQ9UBV2 794 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 CLCA2Q9UQC9 943 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 EMSYQ7Z589 1322 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 TDP2O95551 362 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 GGCXP38435 758 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 DUOXA2Q1HG44 320 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 DCUN1D1Q96GG9 259 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 C16orf87Q6PH81 154 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 ZNF507Q8TCN5 953 aa14.4□□□□□ -0.1
CX3CL1-204ENST00000565912 ATP5HO75947 161 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 CCDC85BQ15834 202 aaPredicted RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 CATSPER3Q86XQ3 398 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 FAM161BQ96MY7 647 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 RPAP3Q9H6T3 665 aaPredicted RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 ANKRD65E5RJM6 399 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 APOL1O14791 398 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 SERPIND1P05546 499 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 PNMA6AP0CW24 399 aaPredicted RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 LRRC14Q15048 493 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 GLYCTKQ8IVS8 523 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 RNF149Q8NC42 400 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 SNF8Q96H20 258 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 OSBPL9Q96SU4 736 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 LY9Q9HBG7 655 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 BARHL2Q9NY43 387 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 PIN4Q9Y237 131 aaKnown RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 ZC3H4Q9UPT8 1303 aaKnown RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 SPATA2LQ8IUW3 424 aaPredicted RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 SIRT2Q8IXJ6 389 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 RAB42Q8N4Z0 105 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.112e-9■■□□□ 13.1
CX3CL1-204ENST00000565912 GOLPH3LQ9H4A5 285 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 SENP1Q9P0U3 644 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 IZUMO3Q5VZ72 239 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 GRAMD4Q6IC98 578 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 LRRC8EQ6NSJ5 796 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 CCDC137Q6PK04 289 aaKnown RBP14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 NUDT18Q6ZVK8 323 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 ATP11CQ8NB49 1132 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 WNT8AQ9H1J5 351 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 PLEKHA5Q9HAU0 1116 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 PARVAQ9NVD7 372 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 FBXL5Q9UKA1 691 aa14.39□□□□□ -0.11
CX3CL1-204ENST00000565912 ASB14A6NK59 587 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms