RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NXF3Q9H4D5 531 aaKnown RBP18.43■□□□□ 0.54
USB1-211ENST00000565662 LARSQ9P2J5 1176 aaKnown RBP18.43■□□□□ 0.54
USB1-211ENST00000565662 ODF2LQ9ULJ1 636 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 BARX2Q9UMQ3 279 aaPredicted RBP18.43■□□□□ 0.54
USB1-211ENST00000565662 NR2E1Q9Y466 385 aa18.43■□□□□ 0.54
USB1-211ENST00000565662 MYH11P35749 1972 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 MEIS3P2A8K0S8 358 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 HIDE1A8MVS5 230 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 NT5C1B-RDH14C9J2C7 533 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 NRP1O14786 923 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 DCXO43602 365 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 ADH1AP07327 375 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 MTHFRP42898 656 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 OR1G1P47890 313 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 STRN3Q13033 797 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 ATF7IP2Q5U623 682 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 CYP26C1Q6V0L0 522 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 SYT2Q8N9I0 419 aaPredicted RBP18.42■□□□□ 0.54
USB1-211ENST00000565662 SPIRE2Q8WWL2 714 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 SUSD6Q92537 303 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 ZSCAN16Q9H4T2 348 aaPredicted RBP18.42■□□□□ 0.54
USB1-211ENST00000565662 PDZD7Q9H5P4 517 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 KMT5AQ9NQR1 393 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 DNAJB4Q9UDY4 337 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 PARP2Q9UGN5 583 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 USP15Q9Y4E8 981 aaPredicted RBP18.42■□□□□ 0.54
USB1-211ENST00000565662 HCFC2Q9Y5Z7 792 aa18.42■□□□□ 0.54
USB1-211ENST00000565662 MORC2Q9Y6X9 1032 aaPredicted RBP18.42■□□□□ 0.54
USB1-211ENST00000565662 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
USB1-211ENST00000565662 CCDC169A6NNP5 214 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 RBAK-RBAKDNI3L0D1 243 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
USB1-211ENST00000565662 PER2O15055 1255 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 B4GALT5O43286 388 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 GPR37L1O60883 481 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 DDHD2O94830 711 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 THP07101 528 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 TXLNAP40222 546 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 SCNN1GP51170 649 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 YARSP54577 528 aaKnown RBP18.41■□□□□ 0.54
USB1-211ENST00000565662 TUSC3Q13454 348 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 CBX2Q14781 532 aaPredicted RBP18.41■□□□□ 0.54
USB1-211ENST00000565662 PTPN14Q15678 1187 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 CLUL1Q15846 466 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 ECM1Q16610 540 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 TMEM31Q5JXX7 168 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 RINT1Q6NUQ1 792 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 C1orf186Q6ZWK4 172 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 CABP7Q86V35 215 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 ZNF280BQ86YH2 543 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 RASSF8Q8NHQ8 419 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 KCNN1Q92952 543 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 UROC1Q96N76 676 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 NTPCRQ9BSD7 190 aaKnown RBP18.41■□□□□ 0.54
USB1-211ENST00000565662 ARHGAP28Q9P2N2 729 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 TNFSF13BQ9Y275 285 aa18.41■□□□□ 0.54
USB1-211ENST00000565662 SF3B1O75533 1304 aaKnown RBP eCLIP18.41■□□□□ 0.54
USB1-211ENST00000565662 E9PMD0 336 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 CLASP2O75122 1294 aaKnown RBP18.4■□□□□ 0.54
USB1-211ENST00000565662 HIP1RO75146 1068 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 NPTX2P47972 431 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 GLUD2P49448 558 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 PEX3P56589 373 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 KYAT1Q16773 422 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 TMEM119Q4V9L6 283 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 KIAA1841Q6NSI8 718 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 HDAC7Q8WUI4 952 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 MMTAG2Q9BU76 263 aaKnown RBP18.4■□□□□ 0.54
USB1-211ENST00000565662 CCDC94Q9BW85 323 aaPredicted RBP18.4■□□□□ 0.54
USB1-211ENST00000565662 APOL6Q9BWW8 343 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 SFXN1Q9H9B4 322 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 SLC38A7Q9NVC3 462 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 ADAM28Q9UKQ2 775 aa18.4■□□□□ 0.54
USB1-211ENST00000565662 ARIH1Q9Y4X5 557 aaPredicted RBP18.4■□□□□ 0.54
USB1-211ENST00000565662 SPDYE4A6NLX3 237 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 PLS3P13797 630 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 USP41Q3LFD5 358 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 TMEM173Q86WV6 379 aaPredicted RBP18.39■□□□□ 0.53
USB1-211ENST00000565662 BSNDQ8WZ55 320 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 RHOBTB2Q9BYZ6 727 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 ADAM7Q9H2U9 754 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 HES2Q9Y543 173 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 PCDHGC5Q9Y5F6 944 aa18.39■□□□□ 0.53
USB1-211ENST00000565662 A0A087WWV3 80 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 RECQL4O94761 1208 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 PLA2G4BP0C869 781 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 MCF2P10911 925 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 KLRC2P26717 231 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 DSG1Q02413 1049 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 HSP90AA2PQ14568 343 aaPredicted RBP18.38■□□□□ 0.53
USB1-211ENST00000565662 ZRSR1Q15695 479 aaKnown RBP18.38■□□□□ 0.53
USB1-211ENST00000565662 IL17AQ16552 155 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 HERC4Q5GLZ8 1057 aaPredicted RBP18.38■□□□□ 0.53
USB1-211ENST00000565662 ZPBP2Q6X784 338 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 C15orf39Q6ZRI6 1047 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 RNF168Q8IYW5 571 aaPredicted RBP18.38■□□□□ 0.53
USB1-211ENST00000565662 ZFP42Q96MM3 310 aa18.38■□□□□ 0.53
USB1-211ENST00000565662 FNIP2Q9P278 1114 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms