RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 MTHFD1LQ6UB35 978 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 FRMD5Q7Z6J6 570 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 KSR1Q8IVT5 923 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 TRAPPC12Q8WVT3 735 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 KAT2BQ92831 832 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 MTG1Q9BT17 334 aaPredicted RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 MKNK1Q9BUB5 465 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 XPNPEP3Q9NQH7 507 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 TAB2Q9NYJ8 693 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 A0A1W2PQC6 194 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 TARSL2A2RTX5 802 aaKnown RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 NDUFA10O95299 355 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 SMIM10L2AP0DMW4 78 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 SMIM10L2BP0DMW5 78 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 EPB41P11171 864 aaKnown RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 CST5P28325 142 aaPredicted RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 CCND3P30281 292 aaPredicted RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 GRK4P32298 578 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 AARSP49588 968 aaKnown RBP eCLIP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 CAPSQ13938 189 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 MAN2A1Q16706 1144 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 TSR1Q2NL82 804 aaKnown RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZBTB8OSQ8IWT0 167 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 LRRC71Q8N4P6 559 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 EEF2KMTQ96G04 330 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 KIFC3Q9BVG8 833 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 NOC4LQ9BVI4 516 aaKnown RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 VPS16Q9H269 839 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 DMAC2Q9NW81 257 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 WBP1LQ9NX94 342 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 DDX20Q9UHI6 824 aaKnown RBP10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 FRMD4BQ9Y2L6 1034 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 SIP14410 1827 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
CNEP1R1-206ENST00000565556 LGALS16A8MUM7 142 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 CLIC2O15247 247 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 N4BP1O75113 896 aaKnown RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 CAPN15O75808 1086 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 PGK1P00558 417 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 PSMC2P35998 433 aaKnown RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 UBXN1Q04323 297 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 DRP2Q13474 957 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 FKBP15Q5T1M5 1219 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 CDCA2Q69YH5 1023 aaPredicted RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZNF662Q6ZS27 426 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 RHPN2Q8IUC4 686 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 LINC01465Q8N7H1 131 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 PCSK9Q8NBP7 692 aaKnown RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 RNF149Q8NC42 400 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 NOA1Q8NC60 698 aaKnown RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 OR8K1Q8NGG5 319 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 BICD1Q96G01 975 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 DNAJC7Q99615 494 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 NFKBIZQ9BYH8 718 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 HMX1Q9NP08 348 aaPredicted RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 SETD4Q9NVD3 440 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 ARMCX3Q9UH62 379 aaPredicted RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 TRIM17Q9Y577 477 aa10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 EPN1Q9Y6I3 576 aaPredicted RBP10.22□□□□□ -0.77
CNEP1R1-206ENST00000565556 SMIM35A0A1B0GVV1 85 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 MBLAC1A4D2B0 266 aaPredicted RBP10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 PES1O00541 588 aaKnown RBP10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 HNRNPDLO14979 420 aaKnown RBP10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 KIAA0391O15091 583 aaKnown RBP10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 MAPK13O15264 365 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 ADAMTS4O75173 837 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 PIGRP01833 764 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 INHAP05111 366 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 SRGAP2CP0DJJ0 459 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 GARTP22102 1010 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 TNNT3P45378 269 aaPredicted RBP10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 PHKA2P46019 1235 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 CLCN3P51790 818 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 KRT83P78385 493 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 VWA3BQ502W6 1294 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 MARCH8Q5T0T0 291 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 SLFN12LQ6IEE8 588 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 IQCEQ6IPM2 695 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 NFRKBQ6P4R8 1299 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 RNF180Q86T96 592 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 C10orf67Q8IYJ2 551 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 C7orf31Q8N865 590 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 KLHDC9Q8NEP7 349 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 LMBR1Q8WVP7 490 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 GUCA1BQ9UMX6 200 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 AKT3Q9Y243 479 aa10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 LUC7L2Q9Y383 392 aaKnown RBP10.21□□□□□ -0.77
CNEP1R1-206ENST00000565556 C17orf102A2RUQ5 167 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 MYADML2A6NDP7 307 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 LRRIQ3A6PVS8 624 aaPredicted RBP10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 EXOC3O60645 756 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 RNF40O75150 1001 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 CABYRO75952 493 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 AKAP3O75969 853 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 IPO7O95373 1038 aaKnown RBP10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 CYLC1P35663 651 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms