RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SNX29Q8TEQ0 813 aa17.31■□□□□ 0.36
CDH3-204ENST00000565453 MMTAG2Q9BU76 263 aaKnown RBP17.31■□□□□ 0.36
CDH3-204ENST00000565453 POMKQ9H5K3 350 aa17.31■□□□□ 0.36
CDH3-204ENST00000565453 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
CDH3-204ENST00000565453 KLK14Q9P0G3 267 aa17.31■□□□□ 0.36
CDH3-204ENST00000565453 USP20Q9Y2K6 914 aa17.31■□□□□ 0.36
CDH3-204ENST00000565453 ACKR2O00590 384 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 N4BP3O15049 544 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 PRKCBP05771 671 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 GJB2P29033 226 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 PLA2G5P39877 138 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 CLCN4P51793 760 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 ZXDAP98168 799 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 GRIK3Q13003 919 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 MAPK6Q16659 721 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 RARS2Q5T160 578 aaKnown RBP17.3■□□□□ 0.36
CDH3-204ENST00000565453 KIAA0319Q5VV43 1072 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 EEF1DP3Q658K8 133 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 CES5AQ6NT32 575 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 KANK3Q6NY19 840 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 PPFIBP1Q86W92 1011 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 DEPTORQ8TB45 409 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 KIFAP3Q92845 792 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 NECTIN4Q96NY8 510 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 EMILIN2Q9BXX0 1053 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 RAB34Q9BZG1 259 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 MRPL17Q9NRX2 175 aaKnown RBP17.3■□□□□ 0.36
CDH3-204ENST00000565453 PARP2Q9UGN5 583 aa17.3■□□□□ 0.36
CDH3-204ENST00000565453 TECTAO75443 2155 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 E9PMD0 336 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 WEE2P0C1S8 567 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 CDC25AP30304 524 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 MTHFRP42898 656 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 ATP2C1P98194 919 aaPredicted RBP17.29■□□□□ 0.36
CDH3-204ENST00000565453 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
CDH3-204ENST00000565453 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 KIAA1841Q6NSI8 718 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 HFE2Q6ZVN8 426 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 KCNK18Q7Z418 384 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 DAW1Q8N136 415 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 TMEM87AQ8NBN3 555 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 FBXL18Q96ME1 805 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 RPS6KC1Q96S38 1066 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 COLEC11Q9BWP8 271 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 RXFP1Q9HBX9 757 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 CHST7Q9NS84 486 aa17.29■□□□□ 0.36
CDH3-204ENST00000565453 PTGESO14684 152 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 URODP06132 367 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 KLRC2P26717 231 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 MCM2P49736 904 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 DSG1Q02413 1049 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 KRT79Q5XKE5 535 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 FUT10Q6P4F1 479 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 DTHD1Q6ZMT9 781 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 TRIM67Q6ZTA4 783 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 CABP7Q86V35 215 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 IFT74Q96LB3 600 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 RIPOR3Q96MK2 946 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 CXCL16Q9H2A7 254 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 UPF2Q9HAU5 1272 aaKnown RBP17.28■□□□□ 0.36
CDH3-204ENST00000565453 SNTG2Q9NY99 539 aa17.28■□□□□ 0.36
CDH3-204ENST00000565453 DENND4AQ7Z401 1863 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 C2CD4DB7Z1M9 353 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 C2CD2LO14523 706 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 TEX28O15482 410 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 NR1I2O75469 434 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 RECQL4O94761 1208 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 LIG1P18858 919 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 SP100P23497 879 aaPredicted RBP17.27■□□□□ 0.36
CDH3-204ENST00000565453 GLUD2P49448 558 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 EFNA5P52803 228 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 MAPK7Q13164 816 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 NAB2Q15742 525 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 PTPN21Q16825 1174 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 HYIQ5T013 277 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 FAM122AQ96E09 287 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 PAAF1Q9BRP4 392 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 RUSC1Q9BVN2 902 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 GPR62Q9BZJ7 368 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 SFXN1Q9H9B4 322 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 DNM3Q9UQ16 869 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 SSX2IPQ9Y2D8 614 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 NR2E1Q9Y466 385 aa17.27■□□□□ 0.36
CDH3-204ENST00000565453 TMEM221A6NGB7 291 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 M0R296 226 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 NPTX2P47972 431 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 TUSC3Q13454 348 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 ATAT1Q5SQI0 421 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 RINT1Q6NUQ1 792 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 TMC5Q6UXY8 1006 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 C1orf186Q6ZWK4 172 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 GPR149Q86SP6 731 aa17.26■□□□□ 0.35
CDH3-204ENST00000565453 GPR65Q8IYL9 337 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms