RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 CLEC17AQ6ZS10 378 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 HINFPQ9BQA5 517 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 SPON2Q9BUD6 331 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 RABEP2Q9H5N1 569 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 C17orf102A2RUQ5 167 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 CCDC160A6NGH7 325 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 GNGT1P63211 74 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 LRRC71Q8N4P6 559 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 FSD1LQ9BXM9 530 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 TMEM60Q9H2L4 133 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 VCX3BQ9H321 246 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 PARVAQ9NVD7 372 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 DDX56Q9NY93 547 aaKnown RBP20.33■□□□□ 0.85
IFT140-206ENST00000565298 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.85
IFT140-206ENST00000565298 NPHP3-ACAD11A0A0J9YXS1 232 aa20.33■□□□□ 0.84
IFT140-206ENST00000565298 UPP2O95045 317 aa20.33■□□□□ 0.84
IFT140-206ENST00000565298 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.84
IFT140-206ENST00000565298 ZFXP17010 805 aaPredicted RBP20.33■□□□□ 0.84
IFT140-206ENST00000565298 NPEPPSP55786 919 aa20.33■□□□□ 0.84
IFT140-206ENST00000565298 NLRP11P59045 1033 aaKnown RBP20.33■□□□□ 0.84
IFT140-206ENST00000565298 CUL1Q13616 776 aa20.33■□□□□ 0.84
IFT140-206ENST00000565298 TRIP13Q15645 432 aaPredicted RBP20.33■□□□□ 0.84
IFT140-206ENST00000565298 USP50Q70EL3 339 aaPredicted RBP20.33■□□□□ 0.84
IFT140-206ENST00000565298 EFCC1Q9HA90 598 aa20.33■□□□□ 0.84
IFT140-206ENST00000565298 EXOC1LA0A1B0GW35 172 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 CREB3O43889 395 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 STAG3L1P0CL83 205 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 PAPOLAP51003 745 aaKnown RBP20.32■□□□□ 0.84
IFT140-206ENST00000565298 TMEM62Q0P6H9 643 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 GLYCTKQ8IVS8 523 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 DCP1BQ8IZD4 617 aaKnown RBP20.32■□□□□ 0.84
IFT140-206ENST00000565298 C18orf8Q96DM3 657 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 STRNO43815 780 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 MOCS2O96007 188 aaPredicted RBP20.32■□□□□ 0.84
IFT140-206ENST00000565298 C3orf67Q6ZVT6 689 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 KIF2CQ99661 725 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 NUF2Q9BZD4 464 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 ARL4CP56559 192 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 GABPB1Q06547 395 aaPredicted RBP20.32■□□□□ 0.84
IFT140-206ENST00000565298 YAF2Q8IY57 180 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 RFFLQ8WZ73 363 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 AP1M1Q9BXS5 423 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 MSH4O15457 936 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 SERPINB6P35237 376 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 SREBF1P36956 1147 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 ATP1A2P50993 1020 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 ITPRIPL1Q6GPH6 555 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 IFT43Q96FT9 208 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 TJP2Q9UDY2 1190 aa20.32■□□□□ 0.84
IFT140-206ENST00000565298 LSM7Q9UK45 103 aaKnown RBP20.32■□□□□ 0.84
IFT140-206ENST00000565298 CYBBP04839 570 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 GRIK1P39086 918 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 SV2CQ496J9 727 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 SPATC1LQ9H0A9 340 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 TRPV6Q9H1D0 765 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 APEX2Q9UBZ4 518 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 HPS5Q9UPZ3 1129 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 CLTAP09496 248 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 EIF3BP55884 814 aaKnown RBP20.31■□□□□ 0.84
IFT140-206ENST00000565298 HERVK_113P62684 666 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 C2orf54Q08AI8 447 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 DPYDQ12882 1025 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 KLC3Q6P597 504 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 EXOC4Q96A65 974 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 EPAS1Q99814 870 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 CCDC151A5D8V7 595 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 KPNA6O60684 536 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 FMO5P49326 533 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 HSD17B4P51659 736 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 STX1BP61266 288 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 GFPT1Q06210 699 aaPredicted RBP20.31■□□□□ 0.84
IFT140-206ENST00000565298 STK4Q13043 487 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 GLE1Q53GS7 698 aaKnown RBP20.31■□□□□ 0.84
IFT140-206ENST00000565298 SIK2Q9H0K1 926 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 DHX35Q9H5Z1 703 aaKnown RBP20.31■□□□□ 0.84
IFT140-206ENST00000565298 SUPT20HL2P0C7V6 817 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 HEATR6Q6AI08 1181 aaKnown RBP20.31■□□□□ 0.84
IFT140-206ENST00000565298 STK33Q9BYT3 514 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 AAASQ9NRG9 546 aa20.31■□□□□ 0.84
IFT140-206ENST00000565298 ATP8B1O43520 1251 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 PDXDC1Q6P996 788 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 RNF25Q96BH1 459 aaPredicted RBP20.3■□□□□ 0.84
IFT140-206ENST00000565298 HEMGNQ9BXL5 484 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 LIMA1Q9UHB6 759 aaKnown RBP20.3■□□□□ 0.84
IFT140-206ENST00000565298 BAG5Q9UL15 447 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 NKRFO15226 690 aaKnown RBP eCLIP20.3■□□□□ 0.84
IFT140-206ENST00000565298 KRT37O76014 449 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 NME3Q13232 169 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 SPOPLQ6IQ16 392 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 SPDYE1Q8NFV5 336 aaPredicted RBP20.3■□□□□ 0.84
IFT140-206ENST00000565298 AGPAT1Q99943 283 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 TAF6LQ9Y6J9 622 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 PNPLA4P41247 253 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 KRT33BQ14525 404 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 DNERQ8NFT8 737 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 PDCD6IPQ8WUM4 868 aaKnown RBP20.3■□□□□ 0.84
IFT140-206ENST00000565298 CAPS2Q9BXY5 557 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 SP110Q9HB58 689 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 RRAGCQ9HB90 399 aa20.3■□□□□ 0.84
IFT140-206ENST00000565298 TEX33O43247 280 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms