RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ZCWPW1Q9H0M4 648 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PASKQ96RG2 1323 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 A0A1W2PRG0 241 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GOLGA8IPA6NC78 632 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GOLGA8JA6NMD2 632 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 HIP1RO75146 1068 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RPA1P27694 616 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TUBP50607 506 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TBC1D22AQ8WUA7 517 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 STMN4Q9H169 189 aaPredicted RBP21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ARHGEF3Q9NR81 526 aa21.95■■□□□ 1.11
MAP1LC3B-206ENST00000564844 NCANO14594 1321 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 MYO3BQ8WXR4 1341 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 MSH4O15457 936 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CYP26A1O43174 497 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ADCY8P40145 1251 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ITGA8P53708 1063 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DOK7Q18PE1 504 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 GRIPAP1Q4V328 841 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ODR4Q5SWX8 454 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 INTS8Q75QN2 995 aaKnown RBP21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PPM1KQ8N3J5 372 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NAF1Q96HR8 494 aaKnown RBP21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NUP85Q9BW27 656 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CNOT7Q9UIV1 285 aaKnown RBP21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 EMSYQ7Z589 1322 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 WDR91A4D1P6 747 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ENTPD5O75356 428 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 FOXR2Q6PJQ5 311 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 HS2ST1Q7LGA3 356 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 LONP2Q86WA8 852 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 FAM178BQ8IXR5 827 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CCHCR1Q8TD31 782 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ART4Q93070 314 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DYDC2Q96IM9 177 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 MTUS1Q9ULD2 1270 aa21.95■■□□□ 1.1
MAP1LC3B-206ENST00000564844 POC1B-GALNT4F8VUJ3 575 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 MEIS2O14770 477 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 OAS1P00973 400 aaKnown RBP21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 GPC5P78333 572 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SLC47A2Q86VL8 602 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RXFP1Q9HBX9 757 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ATF5Q9Y2D1 282 aaPredicted RBP21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DPPA5A6NC42 116 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 LINGO3P0C6S8 592 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 GM2AP17900 193 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PEX5P50542 639 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RBM5P52756 815 aaKnown RBP eCLIP21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 MIGA2Q7L4E1 593 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 C4orf33Q8N1A6 199 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 TAB3Q8N5C8 712 aaPredicted RBP21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ETNPPLQ8TBG4 499 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ARHGEF1Q92888 912 aaKnown RBP21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 BORCS6Q96GS4 357 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 HERPUD2Q9BSE4 406 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SPATS2LQ9NUQ6 558 aaKnown RBP21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NKIRAS1Q9NYS0 192 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NAALADL1Q9UQQ1 740 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PCDHAC2Q9Y5I4 1007 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SCN7AQ01118 1682 aa21.94■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZMYM2Q9UBW7 1377 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SPDYE5A6NIY4 337 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SMARCA1P28370 1054 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 EPHB2P29323 1055 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SSR1P43307 286 aaKnown RBP21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 GRIK3Q13003 919 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 FAM182AQ5T1J6 154 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SUPT20HQ8NEM7 779 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CKAP2Q8WWK9 683 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZNF653Q96CK0 615 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PIDD1Q9HB75 910 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZNF131P52739 623 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RFX8Q6ZV50 586 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZFPM1Q8IX07 1006 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PCYOX1Q9UHG3 505 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DAGLAQ9Y4D2 1042 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RASA4BC9J798 803 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 RASA4O43374 803 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CTNNA2P26232 953 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SLC10A5Q5PT55 438 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SLFN12Q8IYM2 578 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZNF564Q8TBZ8 553 aaPredicted RBP21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 METTL5Q9NRN9 209 aaKnown RBP21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SERPINB13Q9UIV8 391 aa21.93■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CTCFP49711 727 aaPredicted RBP21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 DRG2P55039 364 aaKnown RBP21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SLC5A5Q92911 643 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 CCDC127Q96BQ5 260 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 NUDCD1Q96RS6 583 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 KIAA1683Q9H0B3 1180 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 BATF3Q9NR55 127 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 AGPAT3Q9NRZ7 376 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PARP2Q9UGN5 583 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 hCG_1984214I3L0E3 225 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 TP73O15350 636 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PPP3CAQ08209 521 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 PPP2R5EQ16537 467 aa21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 ZNF713Q8N859 430 aaPredicted RBP21.92■■□□□ 1.1
MAP1LC3B-206ENST00000564844 SYT11Q9BT88 431 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms