RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PCDHB12Q9Y5F1 795 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 GOLGA6L22H0YM25 854 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 OFD1O75665 1012 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 MCF2P10911 925 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 AKAP5P24588 427 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 CASP1P29466 404 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 BMPR1AP36894 532 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 YARSP54577 528 aaKnown RBP17.5■□□□□ 0.39
RAB40C-208ENST00000564703 UBE2HP62256 183 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 PSMD2Q13200 908 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 CLLU1OSQ5K130 101 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 FAM26FQ5R3K3 315 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 AGMOQ6ZNB7 445 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 Q7L0L9 218 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 TMEM192Q8IY95 271 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 TMEM87AQ8NBN3 555 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 FIZ1Q96SL8 496 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 TTYH1Q9H313 450 aaPredicted RBP17.5■□□□□ 0.39
RAB40C-208ENST00000564703 NXF3Q9H4D5 531 aaKnown RBP17.5■□□□□ 0.39
RAB40C-208ENST00000564703 TMEM206Q9H813 350 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 RC3H2Q9HBD1 1191 aaKnown RBP17.5■□□□□ 0.39
RAB40C-208ENST00000564703 EXOC1Q9NV70 894 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 ANKFY1Q9P2R3 1169 aa17.5■□□□□ 0.39
RAB40C-208ENST00000564703 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
RAB40C-208ENST00000564703 EDN1P05305 212 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 RB1P06400 928 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
RAB40C-208ENST00000564703 CTNNB1P35222 781 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 POSTNQ15063 836 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 L1TD1Q5T7N2 865 aaKnown RBP17.49■□□□□ 0.39
RAB40C-208ENST00000564703 THNSL1Q8IYQ7 743 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 LRRC43Q8N309 656 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 FBXO22Q8NEZ5 403 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 ZBTB45Q96K62 511 aaPredicted RBP17.49■□□□□ 0.39
RAB40C-208ENST00000564703 TIGD1Q96MW7 591 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 RPS6KC1Q96S38 1066 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 GAS2L1Q99501 681 aaPredicted RBP17.49■□□□□ 0.39
RAB40C-208ENST00000564703 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 PTPRHQ9HD43 1115 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
RAB40C-208ENST00000564703 SNTG2Q9NY99 539 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 GDAQ9Y2T3 454 aa17.49■□□□□ 0.39
RAB40C-208ENST00000564703 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
RAB40C-208ENST00000564703 MEIS3P2A8K0S8 358 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
RAB40C-208ENST00000564703 PIGRP01833 764 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 RPN1P04843 607 aaKnown RBP17.48■□□□□ 0.39
RAB40C-208ENST00000564703 MYBP10242 640 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 LAG3P18627 525 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 ALDH7A1P49419 539 aaKnown RBP17.48■□□□□ 0.39
RAB40C-208ENST00000564703 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
RAB40C-208ENST00000564703 GRIN2CQ14957 1233 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
RAB40C-208ENST00000564703 KYAT1Q16773 422 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 EPC2Q52LR7 807 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 CLEC17AQ6ZS10 378 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 MAP4K3Q8IVH8 894 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 ENGASEQ8NFI3 743 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 CLP1Q92989 425 aaKnown RBP17.48■□□□□ 0.39
RAB40C-208ENST00000564703 ACAP3Q96P50 834 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 GAD1Q99259 594 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 C17orf80Q9BSJ5 609 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 PLVAPQ9BX97 442 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 CDT1Q9H211 546 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 PRDM12Q9H4Q4 367 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 RNF19AQ9NV58 838 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 MTMR10Q9NXD2 777 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 KLK14Q9P0G3 267 aa17.48■□□□□ 0.39
RAB40C-208ENST00000564703 ARL5CA6NH57 179 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 NR1I2O75469 434 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
RAB40C-208ENST00000564703 ARHGEF15O94989 841 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 SMC2O95347 1197 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 POMCP01189 267 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 PROZP22891 400 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 GRM5P41594 1212 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 OSTNP61366 133 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 MCL1Q07820 350 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 KMT5BQ4FZB7 885 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 C11orf84Q9BUA3 381 aaPredicted RBP17.47■□□□□ 0.39
RAB40C-208ENST00000564703 STRA6Q9BX79 667 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 GBP3Q9H0R5 595 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 SLC39A2Q9NP94 309 aa17.47■□□□□ 0.39
RAB40C-208ENST00000564703 FNDC1Q4ZHG4 1894 aaPredicted RBP17.47■□□□□ 0.39
RAB40C-208ENST00000564703 EIF3DO15371 548 aaKnown RBP eCLIP17.46■□□□□ 0.39
RAB40C-208ENST00000564703 PPP1R37O75864 691 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 KIF20AO95235 890 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 ALDH2P05091 517 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 MLH1P40692 756 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 DPYDQ12882 1025 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 LRRC55Q6ZSA7 311 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 ZNF507Q8TCN5 953 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 POMGNT1Q8WZA1 660 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 ZNF558Q96NG5 402 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 CDX2Q99626 313 aaPredicted RBP17.46■□□□□ 0.39
RAB40C-208ENST00000564703 MSTO1Q9BUK6 570 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 TBC1D13Q9NVG8 400 aa17.46■□□□□ 0.39
RAB40C-208ENST00000564703 OGTO15294 1046 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms