RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 INPPL1O15357 1258 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 SLC16A4O15374 487 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 LINC01565O15544 149 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 PLS3P13797 630 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 PLCG1P19174 1290 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 LTBRP36941 435 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 SCNN1GP51170 649 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 SMTNP53814 917 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 SMC1AQ14683 1233 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 DDX53Q86TM3 631 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 VPS52Q8N1B4 723 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 EPSTI1Q96J88 318 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 USP28Q96RU2 1077 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 RPS6KC1Q96S38 1066 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 MIOSQ9NXC5 875 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 FAM50BQ9Y247 325 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 NPHP3-ACAD11A0A0J9YXS1 232 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 NRP1O14786 923 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 B4GALT3O60512 393 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 NR1I2O75469 434 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 CXCL14O95715 111 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 EDN1P05305 212 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 TXLNAP40222 546 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 OR1G1P47890 313 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 DLX2Q07687 328 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 MCM6Q14566 821 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 SLC39A14Q15043 492 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 DUSP6Q16828 381 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 DCAF4L1Q3SXM0 396 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 NT5DC1Q5TFE4 455 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 GPBP1Q86WP2 473 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 TMEM173Q86WV6 379 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 TMEM87AQ8NBN3 555 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 RAD54LQ92698 747 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 ZNF396Q96N95 335 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 CLIC6Q96NY7 704 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 NTPCRQ9BSD7 190 aaKnown RBP20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 MRPL4Q9BYD3 311 aaKnown RBP20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 BLOC1S4Q9NUP1 217 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 SNTG2Q9NY99 539 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 LARSQ9P2J5 1176 aaKnown RBP20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 ARHGAP28Q9P2N2 729 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 STK39Q9UEW8 545 aa20.18■□□□□ 0.82
SYNGR3-204ENST00000564642 GRXCR2A6NFK2 248 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 HIDE1A8MVS5 230 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 KRT18P05783 430 aaKnown RBP20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 STRN3Q13033 797 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 STK38Q15208 465 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 CLUL1Q15846 466 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 ARSHQ5FYA8 562 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 FOXD4L5Q5VV16 416 aaPredicted RBP20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 EEF1DP3Q658K8 133 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 COLGALT2Q8IYK4 626 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 MRPL43Q8N983 215 aaKnown RBP20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 SPIRE2Q8WWL2 714 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 FOXD4L4Q8WXT5 416 aaPredicted RBP20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 NECAB3Q96P71 396 aaPredicted RBP20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 ODF2LQ9ULJ1 636 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 TNFSF13BQ9Y275 285 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 ZMYM2Q9UBW7 1377 aa20.17■□□□□ 0.82
SYNGR3-204ENST00000564642 BRWD1Q9NSI6 2320 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 TBX10O75333 385 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 SRGAP2BP0DMP2 458 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 DDIT3P35638 169 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 DSC1Q08554 894 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 GRIK3Q13003 919 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 GIT2Q14161 759 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 USP49Q70CQ1 688 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 KRI1Q8N9T8 703 aaKnown RBP20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 BCL7CQ8WUZ0 217 aaPredicted RBP20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 LARP4BQ92615 738 aaKnown RBP20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 ACO2Q99798 780 aaKnown RBP20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 ZBP1Q9H171 429 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 CD207Q9UJ71 328 aa20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 PRG3Q9Y2Y8 225 aaPredicted RBP20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 MORC2Q9Y6X9 1032 aaPredicted RBP20.16■□□□□ 0.82
SYNGR3-204ENST00000564642 C2orf71A6NGG8 1288 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 H0YCG3 227 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 FAM13AO94988 1023 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 CTSAP10619 480 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 IL9P15248 144 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 NASPP49321 788 aaPredicted RBP20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 RRAGBQ5VZM2 374 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 MYCT1Q8N699 235 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 GSTCDQ8NEC7 633 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 REEP2Q9BRK0 252 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 TCHPQ9BT92 498 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 TARS2Q9BW92 718 aaKnown RBP20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 COLEC11Q9BWP8 271 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 TFIP11Q9UBB9 837 aaKnown RBP20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 GDAQ9Y2T3 454 aa20.15■□□□□ 0.82
SYNGR3-204ENST00000564642 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 RECQL4O94761 1208 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 GLP2RO95838 553 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 THP07101 528 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 ZSCAN22P10073 491 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms