RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 TRAPPC12Q8WVT3 735 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 ABHD8Q96I13 439 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 FNBP1Q96RU3 617 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 ZIC5Q96T25 663 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 ACO2Q99798 780 aaKnown RBP16.88■□□□□ 0.29
COMMD4-210ENST00000564587 FAM213AQ9BRX8 229 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 TSGA10Q9BZW7 698 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 KIF5CO60282 957 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 ZC3H11AO75152 810 aaKnown RBP eCLIP16.87■□□□□ 0.29
COMMD4-210ENST00000564587 GFPT2O94808 682 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 ACTN1P12814 892 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 HOXD10P28358 340 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 EIF4A3P38919 411 aaKnown RBP16.87■□□□□ 0.29
COMMD4-210ENST00000564587 PRKCIP41743 596 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 GCLMP48507 274 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 CLCN3P51790 818 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 LBX1P52954 281 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 JAM2P57087 298 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 MLLT1Q03111 559 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-210ENST00000564587 PPP3CAQ08209 521 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 KLHL30Q0D2K2 578 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 PCBP1Q15365 356 aaKnown RBP eCLIP16.87■□□□□ 0.29
COMMD4-210ENST00000564587 KYAT1Q16773 422 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 TDRD12Q587J7 1177 aaKnown RBP16.87■□□□□ 0.29
COMMD4-210ENST00000564587 C1orf220Q5T0J3 134 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 C10orf76Q5T2E6 689 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 SMYD5Q6GMV2 418 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 TSHZ1Q6ZSZ6 1077 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 VPS36Q86VN1 386 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 NLRP4Q96MN2 994 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 SPC25Q9HBM1 224 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 ARHGAP20Q9P2F6 1191 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 DNAJC12Q9UKB3 198 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 AKT3Q9Y243 479 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 FHOD1Q9Y613 1164 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 EVPLQ92817 2033 aa16.87■□□□□ 0.29
COMMD4-210ENST00000564587 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-210ENST00000564587 INO80B-WBP1J3KQ70 363 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 OGTO15294 1046 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 KRT86O43790 486 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 MAP2K2P36507 400 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 GPC3P51654 580 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 KIF11P52732 1056 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 DLG4P78352 724 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 SP3Q02447 781 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 MCL1Q07820 350 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 PRPF4BQ13523 1007 aaKnown RBP16.86■□□□□ 0.29
COMMD4-210ENST00000564587 MFSD10Q14728 455 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 HGSNATQ68CP4 663 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 IQCEQ6IPM2 695 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 ACRBPQ8NEB7 543 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 FBXL13Q8NEE6 735 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 LMO3Q8TAP4 145 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 TCHPQ9BT92 498 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-210ENST00000564587 TNFSF13BQ9Y275 285 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
COMMD4-210ENST00000564587 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
COMMD4-210ENST00000564587 SMIM35A0A1B0GVV1 85 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 CCDC85CA6NKD9 419 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 HAS3O00219 553 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 ADCY6O43306 1168 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 GNRH1P01148 92 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 GNAT1P11488 350 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 SOX5P35711 763 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 PSEN2P49810 448 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 VAV2P52735 878 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 MBTD1Q05BQ5 628 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 KIAA0753Q2KHM9 967 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 ATF7IP2Q5U623 682 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 MPZL3Q6UWV2 235 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 ENOSF1Q7L5Y1 443 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 APBB1IPQ7Z5R6 666 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-210ENST00000564587 PLEKHO2Q8TD55 490 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 RBAKQ9NYW8 714 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-210ENST00000564587 ANKFY1Q9P2R3 1169 aa16.85■□□□□ 0.29
COMMD4-210ENST00000564587 MBLAC1A4D2B0 266 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-210ENST00000564587 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-210ENST00000564587 SMIM10L2AP0DMW4 78 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 SMIM10L2BP0DMW5 78 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 CYBAP13498 195 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 PROZP22891 400 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 CTGFP29279 349 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 FLT3LGP49771 235 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 GJA9P57773 515 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 NLRP11P59045 1033 aaKnown RBP16.84■□□□□ 0.29
COMMD4-210ENST00000564587 GNG11P61952 73 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 NKX3-2P78367 333 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 KIF5AQ12840 1032 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 ARHGEF6Q15052 776 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 FSCN1Q16658 493 aaKnown RBP16.84■□□□□ 0.29
COMMD4-210ENST00000564587 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 ASTE1Q2TB18 679 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms