RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 LIG1P18858 919 aa19■□□□□ 0.63
USB1-209ENST00000564387 ANP32AP39687 249 aaKnown RBP19■□□□□ 0.63
USB1-209ENST00000564387 AMPD3Q01432 767 aa19■□□□□ 0.63
USB1-209ENST00000564387 STRN3Q13033 797 aa19■□□□□ 0.63
USB1-209ENST00000564387 CAMK1Q14012 370 aa19■□□□□ 0.63
USB1-209ENST00000564387 KCNT2Q6UVM3 1135 aa19■□□□□ 0.63
USB1-209ENST00000564387 FAM178BQ8IXR5 827 aa19■□□□□ 0.63
USB1-209ENST00000564387 KLHL23Q8NBE8 558 aa19■□□□□ 0.63
USB1-209ENST00000564387 SPPL3Q8TCT6 385 aa19■□□□□ 0.63
USB1-209ENST00000564387 MRPL38Q96DV4 380 aaKnown RBP19■□□□□ 0.63
USB1-209ENST00000564387 C7orf25Q9BPX7 421 aa19■□□□□ 0.63
USB1-209ENST00000564387 NRDE2Q9H7Z3 1164 aa19■□□□□ 0.63
USB1-209ENST00000564387 TBX20Q9UMR3 447 aa19■□□□□ 0.63
USB1-209ENST00000564387 PCDHB12Q9Y5F1 795 aa19■□□□□ 0.63
USB1-209ENST00000564387 PRRC2BQ5JSZ5 2229 aaKnown RBP18.99■□□□□ 0.63
USB1-209ENST00000564387 GRM6O15303 877 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 ACTN4O43707 911 aaKnown RBP18.99■□□□□ 0.63
USB1-209ENST00000564387 GTPBP6O43824 516 aaPredicted RBP18.99■□□□□ 0.63
USB1-209ENST00000564387 SLFN14P0C7P3 912 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 MCF2P10911 925 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 PFKFB1P16118 471 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 IGFBP4P22692 258 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 PLCB3Q01970 1234 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 DSC1Q08554 894 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 SFR1Q86XK3 245 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 MAFAQ8NHW3 353 aaPredicted RBP18.99■□□□□ 0.63
USB1-209ENST00000564387 GAD1Q99259 594 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 CDT1Q9H211 546 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 MIOSQ9NXC5 875 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 USP25Q9UHP3 1055 aa18.99■□□□□ 0.63
USB1-209ENST00000564387 A0A1B0GVL5 298 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 B4GALT3O60512 393 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 AKAP5P24588 427 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 NMT1P30419 496 aaKnown RBP18.98■□□□□ 0.63
USB1-209ENST00000564387 MLH1P40692 756 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 GRM5P41594 1212 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 UBE3AQ05086 875 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 MCL1Q07820 350 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 MPZL3Q6UWV2 235 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 APBB1IPQ7Z5R6 666 aaPredicted RBP18.98■□□□□ 0.63
USB1-209ENST00000564387 ZNF280BQ86YH2 543 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 MAP4K3Q8IVH8 894 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 URGCPQ8TCY9 931 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 STAMQ92783 540 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 HVCN1Q96D96 273 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 ZNF558Q96NG5 402 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 LZTS1Q9Y250 596 aa18.98■□□□□ 0.63
USB1-209ENST00000564387 K7ENM7 598 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 FGF18O76093 207 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 DDHD2O94830 711 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 GALTP07902 379 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 DNAJB1P25685 340 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 PPM1AP35813 382 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 BCAR1P56945 870 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 EHHADHQ08426 723 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 PTPROQ16827 1216 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 TMEM132AQ24JP5 1023 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 XKR4Q5GH76 650 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 ALKAL1Q6UXT8 129 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 SLC39A11Q8N1S5 342 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 ZBTB45Q96K62 511 aaPredicted RBP18.97■□□□□ 0.63
USB1-209ENST00000564387 ZFP42Q96MM3 310 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 TMEM175Q9BSA9 504 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 HAPLN2Q9GZV7 340 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 ZHX3Q9H4I2 956 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 GDPD2Q9HCC8 539 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 ALG13Q9NP73 1137 aaKnown RBP18.97■□□□□ 0.63
USB1-209ENST00000564387 PANK4Q9NVE7 773 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 SNTG2Q9NY99 539 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 INPP5FQ9Y2H2 1132 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 PLXNA4Q9HCM2 1894 aa18.97■□□□□ 0.63
USB1-209ENST00000564387 RECQL4O94761 1208 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 ALDH7A1P49419 539 aaKnown RBP18.96■□□□□ 0.63
USB1-209ENST00000564387 NDUFA8P51970 172 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 ALCAMQ13740 583 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 ZNF568Q3ZCX4 644 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 ZC2HC1CQ53FD0 456 aaPredicted RBP18.96■□□□□ 0.63
USB1-209ENST00000564387 HERC4Q5GLZ8 1057 aaPredicted RBP18.96■□□□□ 0.63
USB1-209ENST00000564387 SPOUT1Q5T280 376 aaKnown RBP18.96■□□□□ 0.63
USB1-209ENST00000564387 CCDC65Q8IXS2 484 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 COLGALT2Q8IYK4 626 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 SPG21Q9NZD8 308 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 DNAJB4Q9UDY4 337 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 SERTAD1Q9UHV2 236 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 STYXL1Q9Y6J8 313 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 ATG2AQ2TAZ0 1938 aa18.96■□□□□ 0.63
USB1-209ENST00000564387 PVALEFA0A1B0GWK0 134 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 PTGESO14684 152 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 CLDN3O15551 220 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 FAM189A1O60320 539 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 EFEMP2O95967 443 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 POMCP01189 267 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 IDEP14735 1019 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 SCNN1GP51170 649 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 RNASELQ05823 741 aaKnown RBP18.95■□□□□ 0.62
USB1-209ENST00000564387 GRIK3Q13003 919 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 COASYQ13057 564 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 NAB2Q15742 525 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 SLC39A4Q6P5W5 647 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 CEP120Q8N960 986 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms