RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 SFMBT2Q5VUG0 894 aa11.9□□□□□ -0.5
TCF4-222ENST00000564228 DTHD1Q6ZMT9 781 aa11.9□□□□□ -0.5
TCF4-222ENST00000564228 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.5
TCF4-222ENST00000564228 RASGEF1CQ8N431 466 aa11.9□□□□□ -0.5
TCF4-222ENST00000564228 PAIP2Q9BPZ3 127 aaKnown RBP11.9□□□□□ -0.5
TCF4-222ENST00000564228 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
TCF4-222ENST00000564228 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
TCF4-222ENST00000564228 DPPA5A6NC42 116 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.51
TCF4-222ENST00000564228 HIP1RO75146 1068 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 GJB6O95452 261 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 ZBTB48P10074 688 aaPredicted RBP11.9□□□□□ -0.51
TCF4-222ENST00000564228 CCNB1P14635 433 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 ATP6V1C1P21283 382 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 FLT3P36888 993 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 UBA7P41226 1012 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 HUNKP57058 714 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 LAMB3Q13751 1172 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 PLS1Q14651 629 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 ANO7Q6IWH7 933 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 NEK8Q86SG6 692 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 FBF1Q8TES7 1133 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 TEKT4Q8WW24 435 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 TBC1D5Q92609 795 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 BORCS6Q96GS4 357 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 FMO2Q99518 471 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 SELENOSQ9BQE4 189 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 TRIM9Q9C026 710 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 AGTPBP1Q9UPW5 1226 aa11.9□□□□□ -0.51
TCF4-222ENST00000564228 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.51
TCF4-222ENST00000564228 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
TCF4-222ENST00000564228 FDX1P10109 184 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 CDC25CP30307 473 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
TCF4-222ENST00000564228 PARP6Q2NL67 630 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 C6orf118Q5T5N4 469 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 FASTKD5Q7L8L6 764 aaKnown RBP11.89□□□□□ -0.51
TCF4-222ENST00000564228 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 PRCCQ92733 491 aaPredicted RBP11.89□□□□□ -0.51
TCF4-222ENST00000564228 EZH1Q92800 747 aaPredicted RBP11.89□□□□□ -0.51
TCF4-222ENST00000564228 AK8Q96MA6 479 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 FAM167BQ9BTA0 163 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 TRIM7Q9C029 511 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 RXFP1Q9HBX9 757 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 WDR35Q9P2L0 1181 aa11.89□□□□□ -0.51
TCF4-222ENST00000564228 UTP11Q9Y3A2 253 aaKnown RBP11.89□□□□□ -0.51
TCF4-222ENST00000564228 NFIBO00712 420 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 CEP104O60308 925 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 ABCB7O75027 752 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 ACADSP16219 412 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 DNA2P51530 1060 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 AMPD3Q01432 767 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 STK4Q13043 487 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 KLHL23Q8NBE8 558 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 TRAPPC9Q96Q05 1148 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 GORASP1Q9BQQ3 440 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 ANO3Q9BYT9 981 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 ASCC2Q9H1I8 757 aaPredicted RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 PABPC3Q9H361 631 aaKnown RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 TTC7AQ9ULT0 858 aaPredicted RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 ADAMTS5Q9UNA0 930 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 ARL2BPQ9Y2Y0 163 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 KRIT1O00522 736 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 RGS16O15492 202 aaPredicted RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 TLR2O60603 784 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 PEX10O60683 326 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 RNF8O76064 485 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 POLR2MP0CAP2 368 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 AP3B2Q13367 1082 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 CUL3Q13618 768 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 MOGSQ13724 837 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 GNPTABQ3T906 1256 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 TNFAIP8L3Q5GJ75 292 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 DENND2CQ68D51 928 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 TAOK1Q7L7X3 1001 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 LRRC57Q8N9N7 239 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 REPS2Q8NFH8 660 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 P2RX7Q99572 595 aaKnown RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 PRMT1Q99873 361 aaKnown RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 DDX47Q9H0S4 455 aaKnown RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 EPB41L4BQ9H329 900 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 RNPEPL1Q9HAU8 725 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
TCF4-222ENST00000564228 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
TCF4-222ENST00000564228 CCL15-CCL14A0A0B4J2E2 113 aa11.87□□□□□ -0.51
TCF4-222ENST00000564228 PIK3CDO00329 1044 aa11.87□□□□□ -0.51
TCF4-222ENST00000564228 ATP5HO75947 161 aa11.87□□□□□ -0.51
TCF4-222ENST00000564228 CETPP11597 493 aa11.87□□□□□ -0.51
TCF4-222ENST00000564228 CALB2P22676 271 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms