RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ARF4P18085 180 aaPredicted RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 PROZP22891 400 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 ADSSP30520 456 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 COPB1P53618 953 aaKnown RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 ENPEPQ07075 957 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 FAM26DQ5JW98 314 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 SLC27A1Q6PCB7 646 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 FAM43BQ6ZT52 329 aaPredicted RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 DIS3LQ8TF46 1054 aaKnown RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 WNT8BQ93098 351 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 SAAL1Q96ER3 474 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 MRFAP1L1Q96HT8 127 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
CLK3-214ENST00000564096 IKZF4Q9H2S9 585 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 PDZD7Q9H5P4 517 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 IFNKQ9P0W0 207 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLK3-214ENST00000564096 A0A1B0GTH6 734 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 ZNF233A6NK53 670 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 LGALS16A8MUM7 142 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 N4BP1O75113 896 aaKnown RBP13.96□□□□□ -0.17
CLK3-214ENST00000564096 CSDE1O75534 798 aaKnown RBP13.96□□□□□ -0.17
CLK3-214ENST00000564096 PARNO95453 639 aaKnown RBP13.96□□□□□ -0.17
CLK3-214ENST00000564096 CD4P01730 458 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 EDN1P05305 212 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 IQCF3P0C7M6 154 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 SELPP16109 830 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 BFSP1Q12934 665 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 TRIM60Q495X7 471 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 LRRC8DQ7L1W4 858 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.96□□□□□ -0.17
CLK3-214ENST00000564096 ZBTB33Q86T24 672 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 FAM228AQ86W67 206 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 IRF2BP1Q8IU81 584 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 HACE1Q8IYU2 909 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 TMEM40Q8WWA1 233 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 PAWRQ96IZ0 340 aaKnown RBP13.96□□□□□ -0.17
CLK3-214ENST00000564096 FBXL18Q96ME1 805 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 FAM213AQ9BRX8 229 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 CDT1Q9H211 546 aa13.96□□□□□ -0.17
CLK3-214ENST00000564096 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
CLK3-214ENST00000564096 A0A1B0GUA9 196 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 ADCY5O95622 1261 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 CHRNA1P02708 482 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 GHRP10912 638 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 FGFR4P22455 802 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 CASP4P49662 377 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 ZNF75DP51815 510 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
CLK3-214ENST00000564096 SURF1Q15526 300 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 FBXO47Q5MNV8 452 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 ZNF618Q5T7W0 954 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 TRIM59Q8IWR1 403 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 CPB2Q96IY4 423 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 XPO4Q9C0E2 1151 aaKnown RBP13.95□□□□□ -0.18
CLK3-214ENST00000564096 HIPK3Q9H422 1215 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 CDHR5Q9HBB8 845 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 PTPRHQ9HD43 1115 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 CHST12Q9NRB3 414 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 ATP11BQ9Y2G3 1177 aa13.95□□□□□ -0.18
CLK3-214ENST00000564096 NOC2LQ9Y3T9 749 aaKnown RBP13.95□□□□□ -0.18
CLK3-214ENST00000564096 GOLGA8IPA6NC78 632 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 LRRC10BA6NIK2 292 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 GOLGA8JA6NMD2 632 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 ABLIM1O14639 778 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
CLK3-214ENST00000564096 CLTBP09497 229 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 ZSCAN20P17040 1043 aaPredicted RBP13.94□□□□□ -0.18
CLK3-214ENST00000564096 CDC25BP30305 580 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 RAB27AP51159 221 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 VAMP7P51809 220 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 CYP24A1Q07973 514 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 CCDC173Q0VFZ6 552 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 CETN1Q12798 172 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
CLK3-214ENST00000564096 EEF1DP3Q658K8 133 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 TWF2Q6IBS0 349 aaKnown RBP13.94□□□□□ -0.18
CLK3-214ENST00000564096 CBWD2Q8IUF1 395 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 BRSK2Q8IWQ3 736 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 RDH13Q8NBN7 331 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 TMC2Q8TDI7 906 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 CCDC94Q9BW85 323 aaPredicted RBP13.94□□□□□ -0.18
CLK3-214ENST00000564096 VPS16Q9H269 839 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 NDST4Q9H3R1 872 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 ST3GAL5Q9UNP4 418 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 USP20Q9Y2K6 914 aa13.94□□□□□ -0.18
CLK3-214ENST00000564096 EVPLQ92817 2033 aa13.93□□□□□ -0.18
CLK3-214ENST00000564096 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
CLK3-214ENST00000564096 IL18RAPO95256 599 aa13.93□□□□□ -0.18
CLK3-214ENST00000564096 NPTXRO95502 500 aa13.93□□□□□ -0.18
CLK3-214ENST00000564096 ADRB2P07550 413 aa13.93□□□□□ -0.18
CLK3-214ENST00000564096 CLTAP09496 248 aa13.93□□□□□ -0.18
CLK3-214ENST00000564096 YARSP54577 528 aaKnown RBP13.93□□□□□ -0.18
CLK3-214ENST00000564096 UBXN1Q04323 297 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms