RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 LRRIQ4A6NIV6 560 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 C2CD4DB7Z1M9 353 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 NR1I2O75469 434 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 PAPLNO95428 1278 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 URODP06132 367 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 KLRC2P26717 231 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 OR1G1P47890 313 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 GRIK3Q13003 919 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 MAEAQ7L5Y9 396 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 GPR149Q86SP6 731 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 CABP7Q86V35 215 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 ZBTB8OSQ8IWT0 167 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 CMASQ8NFW8 434 aaPredicted RBP19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 BSNDQ8WZ55 320 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 PBXIP1Q96AQ6 731 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 COLEC11Q9BWP8 271 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 CCDC113Q9H0I3 377 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 PRG3Q9Y2Y8 225 aaPredicted RBP19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 STK24Q9Y6E0 443 aa19.05■□□□□ 0.64
VPS9D1-203ENST00000563798 ARHGEF35A5YM69 484 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 NPTXRO95502 500 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 NAMPTP43490 491 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 GLUD2P49448 558 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 TOB1P50616 345 aaPredicted RBP19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 DSG1Q02413 1049 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 C15orf39Q6ZRI6 1047 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 TAS1R1Q7RTX1 841 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 FBXL6Q8N531 539 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 IGSF22Q8N9C0 903 aa19.04■□□□□ 0.64
VPS9D1-203ENST00000563798 ACKR2O00590 384 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 N4BP3O15049 544 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 TEX28O15482 410 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 SSBP05455 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 ADH1AP07327 375 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 AKAP5P24588 427 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 PPP2R5AQ15172 486 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 ECM1Q16610 540 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 MAPK6Q16659 721 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 KANK3Q6NY19 840 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 TMC5Q6UXY8 1006 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 CYP26C1Q6V0L0 522 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 CDR2LQ86X02 465 aaPredicted RBP19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 UBALD2Q8IYN6 164 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 PLCD3Q8N3E9 789 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 HDAC7Q8WUI4 952 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 APOL6Q9BWW8 343 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 PDZD7Q9H5P4 517 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 LRWD1Q9UFC0 647 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 DPP7Q9UHL4 492 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 SORCS3Q9UPU3 1222 aa19.03■□□□□ 0.64
VPS9D1-203ENST00000563798 TDRD15B5MCY1 1934 aaKnown RBP19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 TTLL13PA6NNM8 815 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 LAD1O00515 517 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 WEE2P0C1S8 567 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 CCT6AP40227 531 aaKnown RBP19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 EFNA5P52803 228 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 PRPF4BQ13523 1007 aaKnown RBP19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 KREMEN2Q8NCW0 462 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 KIFAP3Q92845 792 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 PRRX2Q99811 253 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 TSHZ2Q9NRE2 1034 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 FNIP2Q9P278 1114 aa19.02■□□□□ 0.64
VPS9D1-203ENST00000563798 DENND4AQ7Z401 1863 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 F8W810 466 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 PRKCBP05771 671 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 PRPHP41219 470 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 NHLH1Q02575 133 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 PTGDRQ13258 359 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 TUSC3Q13454 348 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 MTMR3Q13615 1198 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 NBR1Q14596 966 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 RABEP1Q15276 862 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 FUT10Q6P4F1 479 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 SUGP1Q8IWZ8 645 aaKnown RBP19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 TDRD5Q8NAT2 981 aaKnown RBP19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 RAB34Q9BZG1 259 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 GPR62Q9BZJ7 368 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 BHMT2Q9H2M3 363 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 PARP2Q9UGN5 583 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 ADAM28Q9UKQ2 775 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 PIEZO1Q92508 2521 aa19.01■□□□□ 0.63
VPS9D1-203ENST00000563798 C2CD2LO14523 706 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 SP100P23497 879 aaPredicted RBP19■□□□□ 0.63
VPS9D1-203ENST00000563798 NAB2Q15742 525 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 USP41Q3LFD5 358 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 ELMSAN1Q6PJG2 1045 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 DEPTORQ8TB45 409 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 FEZF2Q8TBJ5 459 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 KLK14Q9P0G3 267 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 KIAA1024Q9UPX6 916 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 KIF3AQ9Y496 699 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 PCDHB6Q9Y5E3 794 aa19■□□□□ 0.63
VPS9D1-203ENST00000563798 PTGESO14684 152 aa18.99■□□□□ 0.63
VPS9D1-203ENST00000563798 BRD1O95696 1058 aa18.99■□□□□ 0.63
VPS9D1-203ENST00000563798 GLUD1P00367 558 aa18.99■□□□□ 0.63
VPS9D1-203ENST00000563798 EDN1P05305 212 aa18.99■□□□□ 0.63
VPS9D1-203ENST00000563798 CREMQ03060 361 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms