RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 LMBR1Q8WVP7 490 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 FDXACB1Q9BRP7 624 aaPredicted RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 INO80BQ9C086 356 aaPredicted RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 NUCKS1Q9H1E3 243 aaKnown RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 TOPORSQ9NS56 1045 aaPredicted RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 REXO2Q9Y3B8 237 aaKnown RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 MYADML2A6NDP7 307 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 DYNC1I1O14576 645 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 ABLIM1O14639 778 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 PMM2O15305 246 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 CLDN3O15551 220 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 B4GALT5O43286 388 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 N4BP1O75113 896 aaKnown RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 CSDE1O75534 798 aaKnown RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 TOM1L1O75674 476 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 HTRA3P83110 453 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 EPC2Q52LR7 807 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 NFRKBQ6P4R8 1299 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 AIPL1Q9NZN9 384 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 SIP14410 1827 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 NRCAMQ92823 1304 aa19.59■□□□□ 0.73
COMMD4-208ENST00000563220 MXI1P50539 228 aa19.59■□□□□ 0.73
COMMD4-208ENST00000563220 CACNB2Q08289 660 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-208ENST00000563220 RAPGEF1Q13905 1077 aa19.59■□□□□ 0.73
COMMD4-208ENST00000563220 SEZ6Q53EL9 994 aa19.59■□□□□ 0.73
COMMD4-208ENST00000563220 ZBTB33Q86T24 672 aa19.59■□□□□ 0.73
COMMD4-208ENST00000563220 IFNLR1Q8IU57 520 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-208ENST00000563220 CCDC170Q8IYT3 715 aa19.59■□□□□ 0.73
COMMD4-208ENST00000563220 UQCRHLA0A096LP55 91 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 LDHAP00338 332 aaKnown RBP19.58■□□□□ 0.73
COMMD4-208ENST00000563220 UQCRHP07919 91 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 DLATP10515 647 aaKnown RBP19.58■□□□□ 0.73
COMMD4-208ENST00000563220 HARSP12081 509 aaKnown RBP19.58■□□□□ 0.73
COMMD4-208ENST00000563220 MAP2K2P36507 400 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 EIF4A3P38919 411 aaKnown RBP19.58■□□□□ 0.73
COMMD4-208ENST00000563220 PHKA2P46019 1235 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 JAM2P57087 298 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 MAP2K1Q02750 393 aaPredicted RBP19.58■□□□□ 0.73
COMMD4-208ENST00000563220 ENPEPQ07075 957 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 PSMD6Q15008 389 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 PHLDB3Q6NSJ2 640 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 TSHZ1Q6ZSZ6 1077 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 CD99L2Q8TCZ2 262 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 FAM84AQ96KN4 292 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 TCHPQ9BT92 498 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 TMEM8AQ9HCN3 771 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 PTPRHQ9HD43 1115 aa19.58■□□□□ 0.73
COMMD4-208ENST00000563220 EVPLQ92817 2033 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 MBLAC1A4D2B0 266 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-208ENST00000563220 FAM189A1O60320 539 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 C6orf222P0C671 652 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-208ENST00000563220 PROZP22891 400 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 CYLC1P35663 651 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-208ENST00000563220 GJA9P57773 515 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 ADAM17P78536 824 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 PURAQ00577 322 aaKnown RBP19.58■□□□□ 0.72
COMMD4-208ENST00000563220 CETN1Q12798 172 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 PRPF4BQ13523 1007 aaKnown RBP19.58■□□□□ 0.72
COMMD4-208ENST00000563220 AMHR2Q16671 573 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 KRT39Q6A163 491 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 ZNF516Q92618 1163 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 CCDC42Q96M95 316 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 SPAG5Q96R06 1193 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 MAP7D2Q96T17 732 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 DNAJC12Q9UKB3 198 aa19.58■□□□□ 0.72
COMMD4-208ENST00000563220 EIF3CLB5ME19 914 aaKnown RBP19.57■□□□□ 0.72
COMMD4-208ENST00000563220 ELNP15502 786 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 GTF2H1P32780 548 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 GPC3P51654 580 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 CLDN10P78369 228 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 ARID5AQ03989 594 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 MCL1Q07820 350 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 FAM187BQ17R55 369 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 ASTE1Q2TB18 679 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-208ENST00000563220 ATF7IP2Q5U623 682 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 SV2AQ7L0J3 742 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 IRF2BP2Q7Z5L9 587 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 CDR2LQ86X02 465 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-208ENST00000563220 SEMA4DQ92854 862 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 EIF3CQ99613 913 aaKnown RBP19.57■□□□□ 0.72
COMMD4-208ENST00000563220 PDE11AQ9HCR9 933 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 PRMT7Q9NVM4 692 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-208ENST00000563220 RBAKQ9NYW8 714 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-208ENST00000563220 APEX2Q9UBZ4 518 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 SRRDQ9UH36 339 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 MYO6Q9UM54 1294 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 COQ4Q9Y3A0 265 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 PCNTO95613 3336 aa19.57■□□□□ 0.72
COMMD4-208ENST00000563220 ZNF263O14978 683 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 SEPT4O43236 478 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 ABL1P00519 1130 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 PGK1P00558 417 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 SERPING1P05155 500 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 TNFSF9P41273 254 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 ZNF200P98182 395 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-208ENST00000563220 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-208ENST00000563220 HSP90AA2PQ14568 343 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-208ENST00000563220 EEF1DP3Q658K8 133 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 LMBRD2Q68DH5 695 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-208ENST00000563220 RUFY4Q6ZNE9 571 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms