RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 MIOSQ9NXC5 875 aa18.58■□□□□ 0.56
CLK3-210ENST00000563112 SSX2IPQ9Y2D8 614 aa18.58■□□□□ 0.56
CLK3-210ENST00000563112 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
CLK3-210ENST00000563112 K7ERI5 159 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 GPR37L1O60883 481 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
CLK3-210ENST00000563112 PDCP20941 246 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 DSC1Q08554 894 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 GRIK3Q13003 919 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 PTPN14Q15678 1187 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 SYCE2Q6PIF2 218 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 BRAPQ7Z569 592 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 SUSD6Q92537 303 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 DRC1Q96MC2 740 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 APOL5Q9BWW9 433 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 VN1R3Q9BXE9 311 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 CCDC113Q9H0I3 377 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 S1PR5Q9H228 398 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 MRPL17Q9NRX2 175 aaKnown RBP18.57■□□□□ 0.56
CLK3-210ENST00000563112 DZANK1Q9NVP4 752 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 KLK14Q9P0G3 267 aa18.57■□□□□ 0.56
CLK3-210ENST00000563112 PHLPP2Q6ZVD8 1323 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 CCDC169A6NNP5 214 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 BMP15O95972 392 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 SOD2P04179 222 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 URODP06132 367 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 KLRC2P26717 231 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 PEX3P56589 373 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 ITIH3Q06033 890 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 DMP1Q13316 513 aaPredicted RBP18.56■□□□□ 0.56
CLK3-210ENST00000563112 CUL4AQ13619 759 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 CBX2Q14781 532 aaPredicted RBP18.56■□□□□ 0.56
CLK3-210ENST00000563112 DCAF4L1Q3SXM0 396 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 RINT1Q6NUQ1 792 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 RNF135Q8IUD6 432 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 LRFN3Q9BTN0 628 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 MMTAG2Q9BU76 263 aaKnown RBP18.56■□□□□ 0.56
CLK3-210ENST00000563112 KIFC3Q9BVG8 833 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 HERC2P3Q9BVR0 1158 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 TIPINQ9BVW5 301 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 C17orf75Q9HAS0 396 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 KCNG1Q9UIX4 513 aa18.56■□□□□ 0.56
CLK3-210ENST00000563112 TTLL13PA6NNM8 815 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 HIP1RO75146 1068 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 HYIQ5T013 277 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 GSTCDQ8NEC7 633 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 RPGRIP1Q96KN7 1286 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 AK8Q96MA6 479 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 NECTIN4Q96NY8 510 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 MARCH5Q9NX47 278 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 SNTG2Q9NY99 539 aa18.55■□□□□ 0.56
CLK3-210ENST00000563112 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
CLK3-210ENST00000563112 C5orf42Q9H799 3197 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 VPS37CA5D8V6 355 aaPredicted RBP18.54■□□□□ 0.56
CLK3-210ENST00000563112 FAM86C2PA6NEL3 165 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 SPDYE4A6NLX3 237 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 LOC730098B7Z3J9 87 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 SLC26A4O43511 780 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 NPTX2P47972 431 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 ATF7IP2Q5U623 682 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 KIAA1841Q6NSI8 718 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 C1orf186Q6ZWK4 172 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 KCNK18Q7Z418 384 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 CABP7Q86V35 215 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 SLC22A17Q8WUG5 538 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 CALML4Q96GE6 196 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 RIPOR3Q96MK2 946 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 KLHL5Q96PQ7 755 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 PLIN2Q99541 437 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 RUSC1Q9BVN2 902 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 ADAM7Q9H2U9 754 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 TMEM134Q9H6X4 195 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 KMT5AQ9NQR1 393 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 USP20Q9Y2K6 914 aa18.54■□□□□ 0.56
CLK3-210ENST00000563112 C2CD2LO14523 706 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 THP07101 528 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 CNPP09543 421 aaKnown RBP18.53■□□□□ 0.56
CLK3-210ENST00000563112 EPCAMP16422 314 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 GUCY2CP25092 1073 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 UBA7P41226 1012 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 MTHFRP42898 656 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 GLUD2P49448 558 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 TUSC3Q13454 348 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 EEF1DP3Q658K8 133 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 SYT2Q8N9I0 419 aaPredicted RBP18.53■□□□□ 0.56
CLK3-210ENST00000563112 TNFSF13BQ9Y275 285 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 GDAQ9Y2T3 454 aa18.53■□□□□ 0.56
CLK3-210ENST00000563112 PRR33A8MZF0 331 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 LILRB3O75022 631 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 TADA2AO75478 443 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 RECQL4O94761 1208 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 EDN1P05305 212 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 ADH1AP07327 375 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 SMTNP53814 917 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 USP41Q3LFD5 358 aa18.52■□□□□ 0.56
CLK3-210ENST00000563112 HERC4Q5GLZ8 1057 aaPredicted RBP18.52■□□□□ 0.56
CLK3-210ENST00000563112 ATAT1Q5SQI0 421 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms