RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 ADPGKQ9BRR6 497 aa20.53■□□□□ 0.88
CDH11-206ENST00000562998 TARS2Q9BW92 718 aaKnown RBP20.53■□□□□ 0.88
CDH11-206ENST00000562998 ST6GALNAC4Q9H4F1 302 aa20.53■□□□□ 0.88
CDH11-206ENST00000562998 NSUN3Q9H649 340 aaKnown RBP20.53■□□□□ 0.88
CDH11-206ENST00000562998 SPG21Q9NZD8 308 aa20.53■□□□□ 0.88
CDH11-206ENST00000562998 DNAJB4Q9UDY4 337 aa20.53■□□□□ 0.88
CDH11-206ENST00000562998 TCHHQ07283 1943 aa20.53■□□□□ 0.88
CDH11-206ENST00000562998 FRMD3A2A2Y4 597 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 CARNS1A5YM72 827 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 H0YCG3 227 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 FSCN2O14926 492 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 TRAK2O60296 914 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 FAM13AO94988 1023 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 IRS1P35568 1242 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 ME1P48163 572 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 ALDH7A1P49419 539 aaKnown RBP20.52■□□□□ 0.88
CDH11-206ENST00000562998 ZPBP2Q6X784 338 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 TMEM173Q86WV6 379 aaPredicted RBP20.52■□□□□ 0.88
CDH11-206ENST00000562998 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.52■□□□□ 0.88
CDH11-206ENST00000562998 THNSL1Q8IYQ7 743 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 MYCT1Q8N699 235 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 MRPS27Q92552 414 aaKnown RBP20.52■□□□□ 0.88
CDH11-206ENST00000562998 CDT1Q9H211 546 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 CUEDC2Q9H467 287 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 KBTBD4Q9NVX7 518 aa20.52■□□□□ 0.88
CDH11-206ENST00000562998 TDRD15B5MCY1 1934 aaKnown RBP20.51■□□□□ 0.87
CDH11-206ENST00000562998 ZC3H11AO75152 810 aaKnown RBP eCLIP20.51■□□□□ 0.87
CDH11-206ENST00000562998 POMCP01189 267 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 PIGRP01833 764 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 KRT18P05783 430 aaKnown RBP20.51■□□□□ 0.87
CDH11-206ENST00000562998 SLC11A1P49279 550 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 KRT85P78386 507 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 GTF2BQ00403 316 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 TCEAL5Q5H9L2 206 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 DYMQ7RTS9 669 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 COLGALT2Q8IYK4 626 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 BCL7CQ8WUZ0 217 aaPredicted RBP20.51■□□□□ 0.87
CDH11-206ENST00000562998 TMEM175Q9BSA9 504 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 APOL6Q9BWW8 343 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 STRA6Q9BX79 667 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 SNTG2Q9NY99 539 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 ATP6V1DQ9Y5K8 247 aa20.51■□□□□ 0.87
CDH11-206ENST00000562998 BRWD1Q9NSI6 2320 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.5■□□□□ 0.87
CDH11-206ENST00000562998 NT5C1B-RDH14C9J2C7 533 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 PTGESO14684 152 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 TBCAO75347 108 aaKnown RBP20.5■□□□□ 0.87
CDH11-206ENST00000562998 TOM1L1O75674 476 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 PPP1R37O75864 691 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 RECQL4O94761 1208 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 EFEMP2O95967 443 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 SCNN1GP51170 649 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 ERVFC1P60507 584 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 RNASELQ05823 741 aaKnown RBP20.5■□□□□ 0.87
CDH11-206ENST00000562998 STRN3Q13033 797 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 CNNM4Q6P4Q7 775 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 SLC17A8Q8NDX2 589 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 IGSF21Q96ID5 467 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 CXCL16Q9H2A7 254 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 TNMDQ9H2S6 317 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 TLR9Q9NR96 1032 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 SEL1LQ9UBV2 794 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 TBX20Q9UMR3 447 aa20.5■□□□□ 0.87
CDH11-206ENST00000562998 MCF2P10911 925 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 GRM5P41594 1212 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 NAB2Q15742 525 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 TMEM132AQ24JP5 1023 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 CTC1Q2NKJ3 1217 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 XKR4Q5GH76 650 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 ADALQ6DHV7 355 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 PDE12Q6L8Q7 609 aaKnown RBP20.49■□□□□ 0.87
CDH11-206ENST00000562998 MPZL3Q6UWV2 235 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 ZNF720Q7Z2F6 126 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 FAM178BQ8IXR5 827 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 CEP120Q8N960 986 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 IQUBQ8NA54 791 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 ZBTB45Q96K62 511 aaPredicted RBP20.49■□□□□ 0.87
CDH11-206ENST00000562998 HAPLN2Q9GZV7 340 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 KLK14Q9P0G3 267 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 THEGQ9P2T0 379 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 PARP2Q9UGN5 583 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 COG5Q9UP83 839 aa20.49■□□□□ 0.87
CDH11-206ENST00000562998 K7ENM7 598 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 GAP43P17677 238 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 NMT1P30419 496 aaKnown RBP20.48■□□□□ 0.87
CDH11-206ENST00000562998 ABCD1P33897 745 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 NUCB2P80303 420 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 KRT17Q04695 432 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 MCL1Q07820 350 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 HYAL1Q12794 435 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 GRIK3Q13003 919 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 ZNF568Q3ZCX4 644 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 ALKAL1Q6UXT8 129 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 APBB1IPQ7Z5R6 666 aaPredicted RBP20.48■□□□□ 0.87
CDH11-206ENST00000562998 SFR1Q86XK3 245 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 MAP4K3Q8IVH8 894 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 ATXN2LQ8WWM7 1075 aaKnown RBP20.48■□□□□ 0.87
CDH11-206ENST00000562998 DHX58Q96C10 678 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 SPATA32Q96LK8 384 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 VN1R3Q9BXE9 311 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms