RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 FAM117BQ6P1L5 589 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 DCP1AQ9NPI6 582 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PCDHA10Q9Y5I2 948 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 A0A087WUV0 522 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 FTLP02792 175 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PRKCBP05771 671 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 HMBSP08397 361 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 ATP1A3P13637 1013 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 ZNF157P51786 506 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 TPI1P60174 286 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 EMBQ6PCB8 327 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 TBC1D1Q86TI0 1168 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 EIF2AK1Q9BQI3 630 aaKnown RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 SLC13A1Q9BZW2 595 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 ABCB6Q9NP58 842 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 LGALS16A8MUM7 142 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 KRT14P02533 472 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 STAT5BP51692 787 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 EFNA5P52803 228 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 CASP8Q14790 479 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 KRT72Q14CN4 511 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 CASP1P29466 404 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 RAP1GDS1P52306 607 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 MTMR2Q13614 643 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 C1orf146Q5VVC0 180 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PKN3Q6P5Z2 889 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 TRIM72Q6ZMU5 477 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 RGS9BPQ6ZS82 235 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 CYB5R4Q7L1T6 521 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PPHLN1Q8NEY8 458 aaKnown RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 ZFYVE19Q96K21 471 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 NEO1Q92859 1461 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 SNAP23O00161 211 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 PRRG1O14668 218 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 ARIH2O95376 493 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 HIST1H2AGP0C0S8 130 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-204ENST00000562303 HIST1H2ADP20671 130 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 AKT1P31749 480 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-204ENST00000562303 RHOT1Q8IXI2 618 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 ZBED8Q8IZ13 594 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 APPL2Q8NEU8 664 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 HIST1H2AHQ96KK5 128 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 FOPNLQ96NB1 174 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 HIST1H2AJQ99878 128 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 H2AFJQ9BTM1 129 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 JPH1Q9HDC5 661 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-204ENST00000562303 PIK3R2O00459 728 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 DYNC1LI2O43237 492 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-204ENST00000562303 C6orf222P0C671 652 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-204ENST00000562303 IRF1P10914 325 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 TYK2P29597 1187 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 ATXN7L3BQ96GX2 97 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 RARBP10826 455 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 ENOSF1Q7L5Y1 443 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-204ENST00000562303 KATNAL1Q9BW62 490 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 PARVAQ9NVD7 372 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 FBXL5Q9UKA1 691 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 AP1ARQ63HQ0 302 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 NUDCD3Q8IVD9 361 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 STX19Q8N4C7 294 aa11.9□□□□□ -0.5
RPAP1-204ENST00000562303 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.51
RPAP1-204ENST00000562303 PRCPP42785 496 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 PMS2P54278 862 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 ZC3H18Q86VM9 953 aaKnown RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 EML4Q9HC35 981 aaKnown RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 ZFYVE28Q9HCC9 887 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 SDE2Q6IQ49 451 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 MICALL2Q8IY33 904 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 GFAPP14136 432 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 HMOX2P30519 316 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 TAP1Q03518 808 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 SNX17Q15036 470 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 ZNF507Q8TCN5 953 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 SEPT5Q99719 369 aaPredicted RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 SPON1Q9HCB6 807 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 DCTN4Q9UJW0 460 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 EMSYQ7Z589 1322 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 STK36Q9NRP7 1315 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 YWHABP31946 246 aaKnown RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 ORC2Q13416 577 aaPredicted RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 CCDC85BQ15834 202 aaPredicted RBP11.89□□□□□ -0.51
RPAP1-204ENST00000562303 BRINP3Q76B58 766 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 HAUS6Q7Z4H7 955 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 MUC3BQ9H195 1237 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 ABHD10Q9NUJ1 306 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 BARHL2Q9NY43 387 aa11.89□□□□□ -0.51
RPAP1-204ENST00000562303 AGAP1Q9UPQ3 857 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms