RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CCDC51Q96ER9 411 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 RPS6KC1Q96S38 1066 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 PAAF1Q9BRP4 392 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 CCDC113Q9H0I3 377 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 ZBP1Q9H171 429 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 C2orf40Q9H1Z8 148 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 NGRNQ9NPE2 291 aaKnown RBP10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 MARCH5Q9NX47 278 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 LZTS1Q9Y250 596 aa10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
NSMCE1-203ENST00000562039 K7ELQ4 463 aaPredicted RBP10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 N4BP3O15049 544 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 RECQL4O94761 1208 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 PLA2G4BP0C869 781 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 MUTP22033 750 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 IGFBP6P24592 240 aaPredicted RBP10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 UBA7P41226 1012 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 NPTX2P47972 431 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 ZP2Q05996 745 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 SMAD4Q13485 552 aaKnown RBP10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 PPP2R5AQ15172 486 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 SEZ6Q53EL9 994 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 ATF7IP2Q5U623 682 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 ANKRD54Q6NXT1 300 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 PPP4R3CPQ6ZMV5 832 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 C1orf186Q6ZWK4 172 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 USP49Q70CQ1 688 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 DDX53Q86TM3 631 aaKnown RBP10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 COLGALT2Q8IYK4 626 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 CEP120Q8N960 986 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 KIFAP3Q92845 792 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 ZBTB45Q96K62 511 aaPredicted RBP10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 RPGRIP1Q96KN7 1286 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 CLIC6Q96NY7 704 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 TARS2Q9BW92 718 aaKnown RBP10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 NFKBIZQ9BYH8 718 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 ZHX3Q9H4I2 956 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 KMT5AQ9NQR1 393 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 HCFC2Q9Y5Z7 792 aa10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 TDRD15B5MCY1 1934 aaKnown RBP10.44□□□□□ -0.74
NSMCE1-203ENST00000562039 BDP1A6H8Y1 2624 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 K7ERI5 159 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 ACKR2O00590 384 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SPATA31D3P0C874 917 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 CTSAP10619 480 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SLC12A3P55017 1021 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 DMP1Q13316 513 aaPredicted RBP10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 MCM6Q14566 821 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 PTPN14Q15678 1187 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SMAD2Q15796 467 aaKnown RBP10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 PUS10Q3MIT2 529 aaKnown RBP10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 TMEM119Q4V9L6 283 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 RARS2Q5T160 578 aaKnown RBP10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SYCE2Q6PIF2 218 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SPATA31D4Q6ZUB0 917 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 TAS1R3Q7RTX0 852 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 BRAPQ7Z569 592 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 GPBP1Q86WP2 473 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 HACE1Q8IYU2 909 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 TMEM130Q8N3G9 435 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SYT2Q8N9I0 419 aaPredicted RBP10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 SMRP1Q8NCR6 262 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 GSTCDQ8NEC7 633 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 EPSTI1Q96J88 318 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 ADPGKQ9BRR6 497 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 TMEM175Q9BSA9 504 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 UBN1Q9NPG3 1134 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 TSHZ2Q9NRE2 1034 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 KANSL3Q9P2N6 904 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 MTMR6Q9Y217 621 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 FAM50BQ9Y247 325 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 GIT1Q9Y2X7 761 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 STK24Q9Y6E0 443 aa10.43□□□□□ -0.74
NSMCE1-203ENST00000562039 MUC3AQ02505 3323 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 C5orf42Q9H799 3197 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 TULP1O00294 542 aaPredicted RBP10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 PTGESO14684 152 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 KRT18P05783 430 aaKnown RBP10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 CNPP09543 421 aaKnown RBP10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 RPL17P18621 184 aaKnown RBP10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 PLCG1P19174 1290 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 KLRC2P26717 231 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 MATR3P43243 847 aaKnown RBP eCLIP10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 COASYQ13057 564 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 PCBP1Q15365 356 aaKnown RBP eCLIP10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 FAM187BQ17R55 369 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 ZNF568Q3ZCX4 644 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 ARSHQ5FYA8 562 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 TMC5Q6UXY8 1006 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 ADHFE1Q8IWW8 467 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 CALML4Q96GE6 196 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 PRIMPOLQ96LW4 560 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 DRC1Q96MC2 740 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 KLHL5Q96PQ7 755 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 USP28Q96RU2 1077 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 CDCA3Q99618 268 aaPredicted RBP10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 TCHPQ9BT92 498 aa10.42□□□□□ -0.74
NSMCE1-203ENST00000562039 COLEC11Q9BWP8 271 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms