RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 TCTN3Q6NUS6 607 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 FAM111BQ6SJ93 734 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 TPH2Q8IWU9 490 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 TCEAL8Q8IYN2 117 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 PQLC1Q8N2U9 271 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 PRR18Q8N4B5 295 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 IL17RAQ96F46 866 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 RBM15Q96T37 977 aaKnown RBP eCLIP7.28□□□□□ -1.24
DENND4A-204ENST00000562028 CHPF2Q9P2E5 772 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 SIK3Q9Y2K2 1263 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 SLC30A1Q9Y6M5 507 aa7.28□□□□□ -1.24
DENND4A-204ENST00000562028 ITGB3P05106 788 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 SLC6A9P48067 706 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 GZMKP49863 264 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 NFIXQ14938 502 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 PPP4R3AQ6IN85 833 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 USP45Q70EL2 814 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 LIMS2Q7Z4I7 341 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 ARL8AQ96BM9 186 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 BORCS6Q96GS4 357 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 OR14A2Q96R54 314 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 UHRF1Q96T88 793 aaPredicted RBP7.27□□□□□ -1.25
DENND4A-204ENST00000562028 PLA2G3Q9NZ20 509 aa7.27□□□□□ -1.25
DENND4A-204ENST00000562028 ZFR2Q9UPR6 939 aaKnown RBP7.27□□□□□ -1.25
DENND4A-204ENST00000562028 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
DENND4A-204ENST00000562028 SGTAO43765 313 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 DTNBO60941 627 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 RPLP2P05387 115 aaKnown RBP7.26□□□□□ -1.25
DENND4A-204ENST00000562028 APBA1Q02410 837 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 MRPL49Q13405 166 aaKnown RBP7.26□□□□□ -1.25
DENND4A-204ENST00000562028 C3orf36Q3SXR2 165 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 RHOT1Q8IXI2 618 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 TRMT2AQ8IZ69 625 aaKnown RBP7.26□□□□□ -1.25
DENND4A-204ENST00000562028 FUKQ8N0W3 1084 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 MYO1HQ8N1T3 1032 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 TSR2Q969E8 191 aaKnown RBP7.26□□□□□ -1.25
DENND4A-204ENST00000562028 C20orf173Q96LM9 149 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 MPHOSPH9Q99550 1183 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 LANCL2Q9NS86 450 aa7.26□□□□□ -1.25
DENND4A-204ENST00000562028 CFAP20Q9Y6A4 193 aaKnown RBP7.26□□□□□ -1.25
DENND4A-204ENST00000562028 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 PATE3B3GLJ2 98 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 ADCY6O43306 1168 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 HOXA3O43365 443 aaPredicted RBP7.25□□□□□ -1.25
DENND4A-204ENST00000562028 FOXS1O43638 330 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 OFD1O75665 1012 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 GUCY1A2P33402 732 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 PTPN7P35236 360 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 CDC42EP1Q00587 391 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 ATAT1Q5SQI0 421 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 PRAMEF14Q5SWL7 426 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 MFSD5Q6N075 450 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 ZNF572Q7Z3I7 529 aaPredicted RBP7.25□□□□□ -1.25
DENND4A-204ENST00000562028 MAGEB6Q8N7X4 407 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 DNERQ8NFT8 737 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 MDM1Q8TC05 714 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 HPS3Q969F9 1004 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 PDCD2LQ9BRP1 358 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 GTPBP4Q9BZE4 634 aaKnown RBP7.25□□□□□ -1.25
DENND4A-204ENST00000562028 SLC12A5Q9H2X9 1139 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.25□□□□□ -1.25
DENND4A-204ENST00000562028 CNOT11Q9UKZ1 510 aaKnown RBP7.25□□□□□ -1.25
DENND4A-204ENST00000562028 NOB1Q9ULX3 412 aaKnown RBP7.25□□□□□ -1.25
DENND4A-204ENST00000562028 PCDHA13Q9Y5I0 950 aa7.25□□□□□ -1.25
DENND4A-204ENST00000562028 IL2RBP14784 551 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 HSPA6P17066 643 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 LPOP22079 712 aaPredicted RBP7.24□□□□□ -1.25
DENND4A-204ENST00000562028 FOXL1Q12952 345 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 SP140Q13342 867 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 IL10RAQ13651 578 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 FAM47AQ5JRC9 791 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 FKBP15Q5T1M5 1219 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 IFIT1BQ5T764 474 aaKnown RBP7.24□□□□□ -1.25
DENND4A-204ENST00000562028 ERICH6BQ5W0A0 696 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 LILRA6Q6PI73 481 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 EPM2AIP1Q7L775 607 aaPredicted RBP7.24□□□□□ -1.25
DENND4A-204ENST00000562028 POLNQ7Z5Q5 900 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 CATIPQ7Z7H3 387 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 TTC7BQ86TV6 843 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 REPS2Q8NFH8 660 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 CASKIN2Q8WXE0 1202 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 CLIP3Q96DZ5 547 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 TMEM176AQ96HP8 235 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 ZNF512Q96ME7 567 aaPredicted RBP7.24□□□□□ -1.25
DENND4A-204ENST00000562028 SENP6Q9GZR1 1112 aaPredicted RBP7.24□□□□□ -1.25
DENND4A-204ENST00000562028 NMRK2Q9NPI5 230 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 TDP1Q9NUW8 608 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 TMEM140Q9NV12 185 aa7.24□□□□□ -1.25
DENND4A-204ENST00000562028 ZMYM3Q14202 1370 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 GOLGA6CA6NDK9 693 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 GOLGA6BA6NDN3 693 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 PRPF3O43395 683 aaKnown RBP7.23□□□□□ -1.25
DENND4A-204ENST00000562028 MARCH6O60337 910 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 GOLGA6DP0CG33 693 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 MSX2P35548 267 aaPredicted RBP7.23□□□□□ -1.25
DENND4A-204ENST00000562028 FLT3LGP49771 235 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 MLC1Q15049 377 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 MINDY4Q4G0A6 757 aa7.23□□□□□ -1.25
DENND4A-204ENST00000562028 CCHCR1Q8TD31 782 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms