RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 NPLOC4Q8TAT6 608 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 ASAP3Q8TDY4 903 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 SCFD2Q8WU76 684 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 ATRIPQ8WXE1 791 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 MAML3Q96JK9 1138 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 FBXL18Q96ME1 805 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 MPHOSPH6Q99547 160 aaKnown RBP7.14□□□□□ -1.27
CAPN3-210ENST00000561817 CBWD1Q9BRT8 395 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 KIFC3Q9BVG8 833 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 POLR3FQ9H1D9 316 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-210ENST00000561817 TMEM206Q9H813 350 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 ATP6V0A4Q9HBG4 840 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 PLCB1Q9NQ66 1216 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 TBX20Q9UMR3 447 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 PLAGL2Q9UPG8 496 aa7.14□□□□□ -1.27
CAPN3-210ENST00000561817 LUC7L2Q9Y383 392 aaKnown RBP7.14□□□□□ -1.27
CAPN3-210ENST00000561817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.14□□□□□ -1.27
CAPN3-210ENST00000561817 PES1O00541 588 aaKnown RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TERTO14746 1132 aaKnown RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 PMM2O15305 246 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 NRDCO43847 1150 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TLR2O60603 784 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 PIGRP01833 764 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 AFPP02771 609 aaKnown RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 EDN1P05305 212 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 ADRB2P07550 413 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TPM1P09493 284 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 HOXC6P09630 235 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TXNP10599 105 aaKnown RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 EPB41P11171 864 aaKnown RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TNNT1P13805 278 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 PON1P27169 355 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 MAPK4P31152 587 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 RFC5P40937 340 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 ARHGAP25P42331 645 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 CYP2J2P51589 502 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TERF1P54274 439 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 DMP1Q13316 513 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 DRP2Q13474 957 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TTLL4Q14679 1199 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 PPP2R5AQ15172 486 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 ASTE1Q2TB18 679 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 GJC2Q5T442 439 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 WDR78Q5VTH9 848 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 FAM160B1Q5W0V3 765 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 HGSNATQ68CP4 663 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 CYP26C1Q6V0L0 522 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 HS2ST1Q7LGA3 356 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 TRIM50Q86XT4 487 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 LINC01465Q8N7H1 131 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 GPATCH11Q8N954 259 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 LMO3Q8TAP4 145 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 ATP8B4Q8TF62 1192 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 SYN2Q92777 582 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 FAM167AQ96KS9 214 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 C16orf45Q96MC5 204 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 SPATA33Q96N06 139 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 DESI2Q9BSY9 194 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 LSM14BQ9BX40 385 aaKnown RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 MLXIPQ9HAP2 919 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 KMT5AQ9NQR1 393 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 FAM207AQ9NSI2 230 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 NRBP2Q9NSY0 501 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 RNF186Q9NXI6 227 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 CEP72Q9P209 647 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 CPA4Q9UI42 421 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 FBXL5Q9UKA1 691 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 AJAP1Q9UKB5 411 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-210ENST00000561817 USP20Q9Y2K6 914 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 STYXL1Q9Y6J8 313 aa7.13□□□□□ -1.27
CAPN3-210ENST00000561817 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 DENND3A2RUS2 1198 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ZNF263O14978 683 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CAPN5O15484 640 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CCP110O43303 1012 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ADCY6O43306 1168 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ZSCAN12O43309 604 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 NDUFA10O95299 355 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 LCA5LO95447 670 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ACTN1P12814 892 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 XRCC5P13010 732 aaKnown RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 TRIM21P19474 475 aaKnown RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 SLC9A1P19634 815 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 SCP2P22307 547 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CTGFP29279 349 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 NAMPTP43490 491 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 SLC26A2P50443 739 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 LBX1P52954 281 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 SMTNP53814 917 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 JAM2P57087 298 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ENPEPQ07075 957 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CRHR2Q13324 411 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 LAMC2Q13753 1193 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CAPSQ13938 189 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 PTPN14Q15678 1187 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CBWD6Q4V339 395 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CBWD3Q5JTY5 395 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CBWD5Q5RIA9 395 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 KLHDC7AQ5VTJ3 777 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms