RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 MATR3P43243 847 aaKnown RBP eCLIP13.82□□□□□ -0.2
CMTM4-203ENST00000561680 NCBP1Q09161 790 aaKnown RBP13.82□□□□□ -0.2
CMTM4-203ENST00000561680 GPNMBQ14956 572 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 DCAF4L1Q3SXM0 396 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 SLC27A1Q6PCB7 646 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
CMTM4-203ENST00000561680 IRF2BP1Q8IU81 584 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 XXYLT1Q8NBI6 393 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 ZSWIM2Q8NEG5 633 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 TRIM43Q96BQ3 446 aaPredicted RBP13.82□□□□□ -0.2
CMTM4-203ENST00000561680 SAAL1Q96ER3 474 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 EEF2KMTQ96G04 330 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 FBXL18Q96ME1 805 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 ADPGKQ9BRR6 497 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 MSTO1Q9BUK6 570 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 TMX1Q9H3N1 280 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 PCIF1Q9H4Z3 704 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 AGO2Q9UKV8 859 aaKnown RBP13.82□□□□□ -0.2
CMTM4-203ENST00000561680 KIAA1671Q9BY89 1806 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 GBF1Q92538 1859 aa13.82□□□□□ -0.2
CMTM4-203ENST00000561680 CCDC85CA6NKD9 419 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 RBAK-RBAKDNI3L0D1 243 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 MAPK13O15264 365 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 OGTO15294 1046 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 AKAP3O75969 853 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 TIMP1P01033 207 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 CXCL10P02778 98 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 EPB41P11171 864 aaKnown RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 CASP4P49662 377 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 CCL23P55773 120 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 MARSP56192 900 aaKnown RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 TPM4P67936 248 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 NFX1Q12986 1120 aaKnown RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 DSC3Q14574 896 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 PLEKHG4Q58EX7 1191 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 UBXN11Q5T124 520 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 APBB1IPQ7Z5R6 666 aaPredicted RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 TNS4Q8IZW8 715 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 SCLYQ96I15 445 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 CNOT6LQ96LI5 555 aaKnown RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 TCHPQ9BT92 498 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 PRDM5Q9NQX1 630 aaPredicted RBP13.81□□□□□ -0.2
CMTM4-203ENST00000561680 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
CMTM4-203ENST00000561680 GOLGA8IPA6NC78 632 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 GOLGA8JA6NMD2 632 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 KCNJ18B7U540 433 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 EXTL3O43909 919 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 MGEA5O60502 916 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 EXOC3O60645 756 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 NPTXRO95502 500 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 GNA14O95837 355 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 LDHAP00338 332 aaKnown RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 ADRB2P07550 413 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 HARSP12081 509 aaKnown RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 RFC2P35250 354 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 PSMC2P35998 433 aaKnown RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 SPAG1Q07617 926 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 KCNJ12Q14500 433 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 SNRNP35Q16560 246 aaKnown RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 HSP90AA4PQ58FG1 418 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 ZBTB41Q5SVQ8 909 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 TWF2Q6IBS0 349 aaKnown RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 FAM43BQ6ZT52 329 aaPredicted RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 HTATIP2Q9BUP3 242 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 TRAIPQ9BWF2 469 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
CMTM4-203ENST00000561680 KIAA1586Q9HCI6 787 aa13.8□□□□□ -0.2
CMTM4-203ENST00000561680 NLRC5Q86WI3 1866 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 GOLGA6L3A6NEY3 463 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 ATP1A3P13637 1013 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 ITGB8P26012 769 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 EEF1GP26641 437 aaKnown RBP13.79□□□□□ -0.2
CMTM4-203ENST00000561680 GSE1Q14687 1217 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 KYAT1Q16773 422 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 CCDC40Q4G0X9 1142 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 TCP11X2Q5H9J9 407 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 FRMD5Q7Z6J6 570 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 C7orf61Q8IZ16 206 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 CEP120Q8N960 986 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 LINC01599Q8WXQ3 324 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 APBB2Q92870 758 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 FAM213AQ9BRX8 229 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 FTHL17Q9BXU8 183 aa13.79□□□□□ -0.2
CMTM4-203ENST00000561680 CPSF3Q9UKF6 684 aaKnown RBP13.79□□□□□ -0.2
CMTM4-203ENST00000561680 RAG1P15918 1043 aa13.78□□□□□ -0.2
CMTM4-203ENST00000561680 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms